Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1050 |
Symbol | |
ID | 4285331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1145165 |
End bp | 1147657 |
Gene Length | 2493 bp |
Protein Length | 830 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638140521 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_756281 |
Protein GI | 114569601 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.908027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCAA AAACCCGAGC GACACTCCGC TCACGTCTCG CCTGTTCGAT CAGCGTGCTC GCCCTTCCGC TCGCCGGAAT GGCGGTCGCA GGCACGGCGC AAGCCCAGTC GACCGGCACG TCCCAGGACG TCATCGTCGT CACCGCGACG CGCCGCTCCG AAACCGTGCA GGACGTTCCG CTCAACATTG CTGCCATCGG CGGGTCGCAG ATTGAAGAGC AGGGTTTCGA GGATCTCGCG GACGCCCTCG CCTATGTGCC GGGCATCAAC ATTGTCGATC GCGGCGGCCG CCAGGGCAAT CCGATCATCG TGCGCGGCCT GAACGCCGAC CCGATCGGTT CGGGCGATGG CGACAATAGC GGTGGCGGCA CCGTGGCAAC CTATCTCGGT GAAATCCCGC TCTTCATCGA TCTCAAGATG AATGATCTCG AGCGCGTCGA AGTCCTGCTC GGGCCGCAGG GCACCCTCTA TGGTGCCGGC ACGCTGGGCG GGGCCATCCG TTATCTGCCG AACCGTCCGG ATTTCGACAG CAACATGCTG CAGGTCCGCT CCTCCTTCTA CCAGTATTCC GAAGCCAACT CGCCGTCTGC CGATATCGGC TTCACTTTCA ACCACGCCGT ATCAGACACA TTCGCTATCC GCGGTTCGCT TGACGTGCTG CATGATAGCG GCTTCACCGA CTATAATTAT CGCGTCCGCG AGCCCGGCGT GTCCAACCCC AATCCGGATT TCAACGATCC GGCCGATGTT GCGGCAAACC TGGCACCGGT CGCCGATGCC GACGGTGAAG AGGCCCTCTC CGGCCGCATC GCGGCGCGTT GGGCGCCGAC CGATTGGCTC GACGCCACTG CCACCTACTA TTTCCAGAAC CAGGACATTG AAGGTCGCCA GATTTCCTCG CGTCGTTCGC CGGTCCCGGC CAGCGCTTAC GAGTCCGCCC TGCGTGTGCT TGAGCCGATC GAGCGCAACA ATGAACTGCT GGCCCTCGAG CTGACCGCCG ATCTCGGTTT TGCCGAGCTG ACCTCGGCCA CCGGCTTCGG TCGCTACAGC GAGGACGGTC AGCGTGACCA GACCGACCTG CTGATCTCGC TGGAATACTC CTATGAGAGT TTCCCGAATT TCACCGCCTT CACGCACGAG CTGGGAGAGG ACGAGTTCTT CAATCAGGAA CTGCGCCTTG TCTCGACCTA TGAGAGCCAG TTCAACTGGA TTGTCGGCTA CTACTACAAC AAGGCGGAAT TCGTCGGGTC CTCGCAGGAG TTCACCCCGA ATTACTCCGA GTATGTGAAC GACAATTTCG GCTTCGGTCT GACCGAAAAC CCGACCGATC TGGAGTATTT CTCCACCGGC AACACCCAGC TGACCGAAAG CGCCCTTTTC GGCGAACTGG GCTGGGACAT CACGGACCGT CTCTCGGTGA CCGTCGGCGG TCGCTATTAC GAGTACGAGC TGGAATCTGT CTCCACGGTG GACTTCCCGC TGTTTGAAGC CCCGACCTAC ACCCCGCTGA CCATCGACGA GATCCGCGAT CTCGCCTTTG ATCCGGCGCT GGCCCAGTCG GATGACGGTT TCCTCTACAA GTTCAACATC GCCTATGATG TGTCGGACGA AATCCTGGCC TATTTCACCG TATCCGAGGG CTATCGGATC GGTGCCTCCA ACGGTCTGGG AACCTGCGCG GCCTATGATC CGGCCGCGAC CCAGGGCGCC TGTGCCCTGG CACCGGGACA GCAATATGGC CCCAATGCCG GCGACATCGC CCAGTTTGAC GAGCGCCAGT ACGGCCCGGA TCAAACGACC AATTACGAAC TCGGTGCCAA GACGACCTGG GCCGATGGTG CCATTGTCTT GAACGGCGCC ATCTTCCTGG TTGAGTGGAC CGATCCGCAG GTGTCTTCGG CCACGGTGAA CGCCAATATT CCGATCACGG TCAACGCGGC TGGTGCGGAA TCGAAGGGCT TCGAACTGCA GGGTTCCTGG CAGGTCGCAC ATAATTTCGA ACTGCGCGGC ACCTACTCCT TCACCCAGTC GGAACTGACC GCTGATGTGC CCTTCCTGAT CCGCACCATC AACACACCAG GCTTCGGCTC GGCGTTCGAG GATGGCCAGT CCGGCGACCG CCTTCCCGGC TCTCCGGAAA CGCAGGCTTC GGTCTTTGGT CGCTACAGCG TCGACATGGC GAGCGGTGCC CAGCTCAACT ATAATCTGGG CATCTCCTAC CAGGGTGACA TCCTGACCCG CACCGGCGGT CGCGGCAGCA GCTCCACGCT GGACAGCTAT TTCGTCGCCA ATGGCTCGAT CAATTATGAC GCCGGCGACT GGGGCGCGAC GCTGTTCATC AACAATATCG GCAATGAATA CATCGAAACC GGTATTCGCA GCACGGCGCT GTCGAACCAG ACCATCAACG GTCATTCGGT CCGCAGCCAT TACGCCAACG TGGCCCCGCC GCGCACCATT GGCGTACGCT TCTACTACCA GTTCGGCGAT TGA
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Protein sequence | MAAKTRATLR SRLACSISVL ALPLAGMAVA GTAQAQSTGT SQDVIVVTAT RRSETVQDVP LNIAAIGGSQ IEEQGFEDLA DALAYVPGIN IVDRGGRQGN PIIVRGLNAD PIGSGDGDNS GGGTVATYLG EIPLFIDLKM NDLERVEVLL GPQGTLYGAG TLGGAIRYLP NRPDFDSNML QVRSSFYQYS EANSPSADIG FTFNHAVSDT FAIRGSLDVL HDSGFTDYNY RVREPGVSNP NPDFNDPADV AANLAPVADA DGEEALSGRI AARWAPTDWL DATATYYFQN QDIEGRQISS RRSPVPASAY ESALRVLEPI ERNNELLALE LTADLGFAEL TSATGFGRYS EDGQRDQTDL LISLEYSYES FPNFTAFTHE LGEDEFFNQE LRLVSTYESQ FNWIVGYYYN KAEFVGSSQE FTPNYSEYVN DNFGFGLTEN PTDLEYFSTG NTQLTESALF GELGWDITDR LSVTVGGRYY EYELESVSTV DFPLFEAPTY TPLTIDEIRD LAFDPALAQS DDGFLYKFNI AYDVSDEILA YFTVSEGYRI GASNGLGTCA AYDPAATQGA CALAPGQQYG PNAGDIAQFD ERQYGPDQTT NYELGAKTTW ADGAIVLNGA IFLVEWTDPQ VSSATVNANI PITVNAAGAE SKGFELQGSW QVAHNFELRG TYSFTQSELT ADVPFLIRTI NTPGFGSAFE DGQSGDRLPG SPETQASVFG RYSVDMASGA QLNYNLGISY QGDILTRTGG RGSSSTLDSY FVANGSINYD AGDWGATLFI NNIGNEYIET GIRSTALSNQ TINGHSVRSH YANVAPPRTI GVRFYYQFGD
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