| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1049 |
|---|
| Symbol | |
|---|
| ID | 4285330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1143413 |
|---|
| End bp | 1145080 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638140520 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_756280 |
|---|
| Protein GI | 114569600 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.691019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.362005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG TTCTTTTGAT TGGTACGGCT GGCCTGGCCA TGCTCGCAGC CTGTACAGCG
ACCGTTGCAC CGCCAACGGC CCCACCTCCG CCACCGGCAC CGCCACCCCC TCCGCCGGCG
CCCTTCATGT CGGAAATGGT CACCGTGACC GGGTCCCGTG TCCGCAGCTC GGCCTATCGC
AATGACGCGA TTGCCGGCGT TGCGAATTTC ACGATGCCCG ATCAGCTGGT CGTCGACCGC
GAACGCTATG AAGACGTCGA TCCCAATCCG GTGATGTCAA CGGCTGATGA GCCGGTCTCG
ACCTTCTCCA TCGATGTCGA CACGGCCAGC TATTCGCTGG TCCGCAACTC GCTGGAGGCC
GGCCGCTTGC CGCCGACCGA TGCCGTGCGG ATCGAGGAGA TGGTCAATTA TTTCGACTAT
GACTATGCCC TGCCGCCGGG ACCCGACGAG CCGTTCGCGA CCCATGTGAC GGTCACCCCG
ACGCCGTGGA ATGCCGACAC CCAGCTGATG CATATCGGCA TCCAGGGTTA TGAGATCATT
CCCGACGAAC GGCCGCGGGC CAATCTGGTC TTCCTGATCG ATGTATCCGG TTCGATGAAT
TCACCCGACA AGCTGCCGCT GGCTGTCCAG GCCATGCACT TGCTGGTTGA TGAATTGCAC
CCGGACGACA CCGTGGCCCT GGTTGTCTAC GCCAGTGCCA GCGGGGTCGT ATTGCCGCCG
ACCGAGGCCC GCAATGCCCG CGAGATCCAC CGCGCACTCG ACAGTCTGAG CGCAGGCGGT
TCAACCGCCG GCGGGGCCGG TCTGGCGCTG GCCTATGACC TCGCCGAACA GAATTTCGAC
GAGGACGCGG TCAATCGGGT CATGCTTCTC ACCGATGGCG ATTTCAATGT CGGCGTGACC
CAGGATGAGC GTCTGGAAGA CTTTGTCGCC CGCAAGCGCG ATAGCGGCAT CTACCTGTCG
GTGATGGGCT TTGGTCGCGG CAATTACAAT GACCAGATGA TGCAGACCAT CGCCCAGGCC
GGCAATGGCA CGGCGGCCTA TATCGACAGT CGCCAGGAAG CCCGGCGCAT GCTGGTCGAG
GAAAGCTTCT CCTCGCTCTT TACGATCGCC AATGACGTCA AGATCCAGGT CGAGTTCAAT
CCGGCCCGTG TCGCCGAATA CCGGCTGATC GGCTATGAGA CCCGGCTGCT TGACCGGGCC
GATTTCAACA ATGATGAAGT CGATGCCGGC GAGATCGGTT CGGGCCATTC GGTCACCGCG
ATCTATGAGA TTGCCGCGCC GGGATCGGAA GGCGTGCTGA TGGAGCCGCT GCGCTATGGC
GGAGCGACGA CGGTCGAGCC GGACCTGGAC GGCGAGTATG GTTTCCTGCG TCTGCGCTAC
AAGCGGCCGG GCGAGGATGA AAGCCGCCTG ATCGAGCGCG CGGTGACCGA TGCCGACACG
GTCGACGATG TCGGCGAGGC CTCGCAGGAG GCCCGCTTCT CGATCGCGGT CGCCGGTTTC
GCCCAACGCT TGCGCGGTGA TGCGTATCTC GCGGAGGGCT ATGACTGGGC CGCGATCCGC
GAAAGCGCTG CCGGGGCGAT CGGTGAAGAT GAATTCGGTT ACCGCGCCGA GTTTCTCGAC
CTGGTCGATC GGGCCCAGGC CGCCGATGAG GCTCGCGACA AACCCTGA
|
|---|
| Protein sequence | MKRVLLIGTA GLAMLAACTA TVAPPTAPPP PPAPPPPPPA PFMSEMVTVT GSRVRSSAYR
NDAIAGVANF TMPDQLVVDR ERYEDVDPNP VMSTADEPVS TFSIDVDTAS YSLVRNSLEA
GRLPPTDAVR IEEMVNYFDY DYALPPGPDE PFATHVTVTP TPWNADTQLM HIGIQGYEII
PDERPRANLV FLIDVSGSMN SPDKLPLAVQ AMHLLVDELH PDDTVALVVY ASASGVVLPP
TEARNAREIH RALDSLSAGG STAGGAGLAL AYDLAEQNFD EDAVNRVMLL TDGDFNVGVT
QDERLEDFVA RKRDSGIYLS VMGFGRGNYN DQMMQTIAQA GNGTAAYIDS RQEARRMLVE
ESFSSLFTIA NDVKIQVEFN PARVAEYRLI GYETRLLDRA DFNNDEVDAG EIGSGHSVTA
IYEIAAPGSE GVLMEPLRYG GATTVEPDLD GEYGFLRLRY KRPGEDESRL IERAVTDADT
VDDVGEASQE ARFSIAVAGF AQRLRGDAYL AEGYDWAAIR ESAAGAIGED EFGYRAEFLD
LVDRAQAADE ARDKP
|
|---|
| |