| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1040 |
|---|
| Symbol | |
|---|
| ID | 4285321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1134306 |
|---|
| End bp | 1136078 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638140511 |
|---|
| Product | amidohydrolase 3 |
|---|
| Protein accession | YP_756271 |
|---|
| Protein GI | 114569591 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.80433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.260287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACC GTACCCTTAT CGCCTTCGCC CTGCCGCTCG GCCTTGTGGT CTTCATCGGC
TTCATCTGCG GCATCATGCT GGCATCGCCG CGAGCGCCCG CCGCACTGGT CTTCCACAAT
GGCTCCATTC GCACGATGAG CGAGGCCGGC ACGGTCGAGG CGCTTTACAT CCGGGACGGC
CGCATCATGG CGGTCGGCGC CCTGGACACC GTGCTCGCCG CGGCACCGCG CGGGGTGCGC
CGGATCGATC TGGAAGGCGG CACTCTGACA CCGGGCCTGA TCGAACCGCA TACCCACCCG
CTCGCCGCCG CCCTCCTGGA CACGGCCATC GACATTTCGG GTCGCACCCA TGGCGACCGC
GCCGCCATCA TGGCGGCCAT TGCCGAGGGG GTAGAAGCCG GCGGCCCCTC GCCCTGGGCC
ATCGCCTTTG GCTGGGATGC GGTCATGCTG GACGGTCTCA CCCCGCCGAG CCTGGCCGAG
CTGGACGCCC TGTCACCGGA CCGGCCGCTC GTCATCCTGA CCCAGATGAT GCATGAAGCC
TTCGCCAACT CCGCGGCACT GGAGGCCGCT GGCATCACAC CCGCCACTCC TGACCCGCAT
GACGGTTTCT TCGAACGCGG CGAAGGCGGG GCGCTGACCG GGCGCGTGGT GGAGGTCACG
GCCGTGCGTC AGCTCATGGC CGGTATTCCG CAGGCCTCTG ACGCGGCCCT GACCTATCTG
CTCGACGGCA CTTATGACGC GTACGCGGCG GCGGGTTACA CCACAATCGG CATCGCCTCC
CTGGTCGGCC GCGCCGAAGA CCCGCTGGGC ATTCTCACCG CGGTGAGCCA TGCTGAGCGG
CCGGCTCTCA ATACGGTGCT CTACACGGCG CCGAGCCGGA ATAGTCGTGC TCTGGACATG
TTCAGCGAAG CGGATGACCG CCACGCCCTG CGCCGCCTGA ATGGTATCAA GCTCTGGCTC
GACGGCTCGC CCTTTGCCGG CGGCGCTGCG AGCGCCGAGC CCTATGCCAA TACGCCACTG
ACCCAGGACA CACTTGGCCT GCCACCAAAC TGGCTGGCGC CGCTGGCCAT GCCGTCCGAC
AGCGTGACGG GGTTTGTCGG CGAGATGCAG GGCTTTGGCT ATCAGATGGC ACTTCACGTC
CAGGGCGAGC GCGCCATCGA TCTGGCACTC GATGCCATCG AGACCGCTCA AACCCATACG
CCCAATCCAG ACGTCCAGCA CAGATTGGAA CATCTCGCCC TGATCACGCC CGACCAGATC
AGCCGGGCCA ACGCACTCGG TGTCTCACTG GGCTTCTTCC CGGACCATAT CGGCAATTAT
GGTCACCGGC TGGAAGACTT GTTCGGACCG GAACGCGCCG CGCGCTACAT GCCGATTGCC
GAAGCGGTCC GGCAGGGCGC GGTTGTGACG ATCCATGGCG ACCATCCAGC GAGCGACATT
GACGCCCTGC GTGTGATGGC CCTGCCCGTC CACCGCCGCA CGCTGACCGG CGAGCCGCTG
GGTGAGCCGA TCGATGCGGA GACGGCTCTT GCCCTGATGA CAATCAATGC CGCCCGGCAA
TTGGGTCTCG CCGACGAGAT CGGCTCCATC GAGGTCGGCA AGCGCGCCGA TCTGACCTGG
TTTGATACCG ACCCGGTTGC CGCCATCGAC GCCGACGCGC CGGTCGCGGT CCGGGGCACC
TGGCTCGCCG GGCAGCCGGT GGATACGCGC GACTGGTCGC TGGACCGGAT CGGCCTTGCC
ATTGCCGCCG CCTGGGGCCA AGTCTTCGGC TAA
|
|---|
| Protein sequence | MTHRTLIAFA LPLGLVVFIG FICGIMLASP RAPAALVFHN GSIRTMSEAG TVEALYIRDG
RIMAVGALDT VLAAAPRGVR RIDLEGGTLT PGLIEPHTHP LAAALLDTAI DISGRTHGDR
AAIMAAIAEG VEAGGPSPWA IAFGWDAVML DGLTPPSLAE LDALSPDRPL VILTQMMHEA
FANSAALEAA GITPATPDPH DGFFERGEGG ALTGRVVEVT AVRQLMAGIP QASDAALTYL
LDGTYDAYAA AGYTTIGIAS LVGRAEDPLG ILTAVSHAER PALNTVLYTA PSRNSRALDM
FSEADDRHAL RRLNGIKLWL DGSPFAGGAA SAEPYANTPL TQDTLGLPPN WLAPLAMPSD
SVTGFVGEMQ GFGYQMALHV QGERAIDLAL DAIETAQTHT PNPDVQHRLE HLALITPDQI
SRANALGVSL GFFPDHIGNY GHRLEDLFGP ERAARYMPIA EAVRQGAVVT IHGDHPASDI
DALRVMALPV HRRTLTGEPL GEPIDAETAL ALMTINAARQ LGLADEIGSI EVGKRADLTW
FDTDPVAAID ADAPVAVRGT WLAGQPVDTR DWSLDRIGLA IAAAWGQVFG
|
|---|
| |