| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0972 |
|---|
| Symbol | |
|---|
| ID | 4284950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1069682 |
|---|
| End bp | 1070383 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638140441 |
|---|
| Product | ribose-5-phosphate isomerase A |
|---|
| Protein accession | YP_756203 |
|---|
| Protein GI | 114569523 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.719291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCC TGCGCCAGAA GACGCTCGCG GCGGCCGCTG CGCTCGACTA TATCGAAAGC
GGCATGACGC TGGGGCTCGG CTCCGGCTCG ACGGCAGAGA TTTTTCTCCG CCTGCTGGGC
GAGAAGATCA AGGACGGTCT GGACGTGCGC GGTGTGCCGA CCTCCCAGCG CACCGCCCAG
ATTGCCGCCG AGAATGGCGT GCCGCTGATC GATGTCGACC ATGTCAACAA TATCGCCATC
ACCATTGATG GCGCCGACGA GGTCGACGGC CGGTTCCAGC TGATCAAGGG CGGCGGCGCC
TGCCTGTTGC GCGAGAAGAT CATCGCCCAT GCGTCCGATC TGATGATCGT CATGGTCGAT
GAGAGCAAGC TGGTTGCGAC CCTGGGCAAG TTCCCGCTTC CCGTTGAGGT CGACCGCTTC
GGCTTTTCAC TGACTGCCAG CCAGGTCTAT GAGGCTTTGC GCAGGGCGGG GATCAAATCG
CCGGACGTCC AGTTGCGCCG CAAGGGCGAC GGGCTGGAGC CATTGGTCAC CGATGGCGGA
AATTACATTC TTGATTGCGC CTGCGAGGCG ATCCCGGATG CCGGTGCTGT TGACAGGGCG
CTGAAGGCCA TCCCCGGTGT GGTCGAGCAC GGCCTGTTCA TCAATCTCGC TCGTGTTGTC
ATCGTCGGCG AGGACGGTGA AGCGCGGGTG ATGGAGCTTT AG
|
|---|
| Protein sequence | MTALRQKTLA AAAALDYIES GMTLGLGSGS TAEIFLRLLG EKIKDGLDVR GVPTSQRTAQ
IAAENGVPLI DVDHVNNIAI TIDGADEVDG RFQLIKGGGA CLLREKIIAH ASDLMIVMVD
ESKLVATLGK FPLPVEVDRF GFSLTASQVY EALRRAGIKS PDVQLRRKGD GLEPLVTDGG
NYILDCACEA IPDAGAVDRA LKAIPGVVEH GLFINLARVV IVGEDGEARV MEL
|
|---|
| |