| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0947 |
|---|
| Symbol | |
|---|
| ID | 4284872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1044757 |
|---|
| End bp | 1045479 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638140415 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_756178 |
|---|
| Protein GI | 114569498 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.941879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGCGG AACTAGCAGC AACGCGGATG TTTGACGGAC ACGGCATGAA GACAGATGAA
CCGGCCAATG CCGGACCCAT CTCCGGCCGT GTCCGCGAAC GCCCGCCGGT CGAAGCGTCG
GCGATGGCCG ACATCCGGGC GGCGGAAGAC AGGTTGATGG CGCGCATCGG CGCGGGTGAT
CGCGATGCGG CACGCGAGCT GATGGCGGCC AACATGTCCC GGATCATCGG TCTCGCCCGG
CGTACGCTGG GTGATCCGAT GGAAGCCGAG GATATCGCCC AGGAGACCTT CCTGCGCGTC
TGGAAAGCGG CTGGCCGTTG GCAGTCTGGT CAGGCGCGGG TGTCCAGCTG GGTATGCCGG
ATTGCCCTCA ATCTCTGCTA TGACCGCCTG CGCAAGCGGC GTGAGGTCCT GACCGACACC
CTGCCGGAAC GGGCCGATGA TACGCCCGGG CAGGACGCGC AGATGGAACA GGCGGAAAGC
GGCAATCGTA TTGCCACGGC GGTGCGGCAA TTGCCGGACC GCCAACGCCA GGCGCTCGAA
CTGGTGCACT TCCAGGAGTT GAGCAATATT GAAGCGGCGG AGATCATGTC GGTAAGTGTG
GATGCGCTTG AATCCCTGCT GGCACGCGGT CGGCGCAAGC TCAAAACGGT GTTGTTGGGC
GACGCCCCCG ATCTGATCGC CAGCTATGCA CGGGGCGGTG ACGCCCGTTA CGGTGACGAA
TGA
|
|---|
| Protein sequence | MVAELAATRM FDGHGMKTDE PANAGPISGR VRERPPVEAS AMADIRAAED RLMARIGAGD
RDAARELMAA NMSRIIGLAR RTLGDPMEAE DIAQETFLRV WKAAGRWQSG QARVSSWVCR
IALNLCYDRL RKRREVLTDT LPERADDTPG QDAQMEQAES GNRIATAVRQ LPDRQRQALE
LVHFQELSNI EAAEIMSVSV DALESLLARG RRKLKTVLLG DAPDLIASYA RGGDARYGDE
|
|---|
| |