Gene Mmar10_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0916 
Symbol 
ID4285248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1012940 
End bp1014910 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content67% 
IMG OID638140384 
Product1A family penicillin-binding protein 
Protein accessionYP_756147 
Protein GI114569467 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.129187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGG AGCCGTTTCG CGCGGATCAC ATGATGGAAC GTGACCGACG CACACGTCGC 
ACGCGCCTGA TCCTCGGCGG CGTGCTGGGC TCGCTTGTCC TGCTGGGCAC GGTGTTGGGC
GTGACCGGCT GGCATTGGGC CTTCCACGAC CTGCCGGCCG CTCCGACTTC GGCCTCCGAA
CTGTGGTCGA CCCGGCGCGA ACCCTCGGTG ACGCTGCAGG ATCGCGACGG TCATGTGCTG
GCGGTACGGG GCCCCTTATA TGCCCGTGCG GTGGCGCTGG ATGCCCTGCC CGAGCATGTA
CCGCAGGCCT TCCTGGCGAT CGAGGACCAG CGCTTTTACG AGCATGACGG CGTCGATCTG
CGCGGCGTTT TCCGGGCCTT GTGGGTCAAT TTCCAGGCCG GCCGCTCGGT CCAGGGTGGT
TCGACCATCA CCATGCAGCT GGTCAAGAAT CTGATCCTGA CGCCGGACCG GCATCTGCGC
CGCAAGATCC AGGAAATGCG GCTGGCGCGG CAGCTGGAAG ACCATCTGAC CAAGACCGAG
ATTCTCGAGC TTTATCTCAA CCGCATCTAT CTGGGCGCCC GCGCCTTTGG CGTCGAAGCG
GCGGCGCAGC GCTATTTCGA CAAGCCGGCG ACCGAGTTGA CCCTGGCCGA GGCGGCACTT
CTGGCGGCCC TGCCCAAGGC ACCCAGCCGG CTTGACCCGA CGGTCAATCT GGCTGCCGCC
CAGGCTCGCG CCGCGACCGT GCTCGACGCC ATGCTGGAGG CCGGTTTCAT CGACCAGGCA
GCCCATGATG CCGCCATCGC CGAACCGGCC GCACCGGTCG CCGACACCTC CGACCCCAAT
GCCACGGCGG TCTGGGGTCA CGCCTTTGAC TATGCCCTCG CCGAAGCCGC CGATCTGGTC
GCCGCCGACG TCCCCGATCT GGTCATCCGC ACCACGCTCG ACCCGGCCCT GTCGCGGGCG
GCACACGACG TCATCGAGAC TGTGCTGGAC GAAGAGGGCG AGGCCCAGAA TGCCGGCGAG
GCCGCGATCA TGCTGCTGGC ACCGGACGGG GCGATCCGGG CCTTTGCCGG GGGCCGCGAC
TATGCGACCA GCCAGTTCAA TCGCGCCATC CAGGCCCAGC GCCAGCCCGG CTCGGCCTTC
AAGCCCTTCG TCTTCGCCGC AGCGCTGGAG GCGGGCTATG ATCCGTCCTC GGCGGTATGG
GACGAGCCGA TCGACCTGGA AGGCTGGACG CCGCAGAATT TCTCCGGCGG GTTTCGCGGT
CTGGTGACCC TGCAAGAAGC GCTGAAACGC TCGATCAACA CGGTCGCGGC CCAGGTCGCA
GACCAGGTTG GCATTGCCCG TGTGGTCGAG GTCGGACAGC GCTTCGGCAT CCGCTCGCCC
TTGCCCGAAC TGCCCGCCAT CGCGCTCGGC GCCGCGGAAG TGAATCTGCT CGAACTGACC
TCGGCCTATG CCGTGTTCGG CAATGACGGG GCCCGCCGCG AGCCCTATTT CATCACCTCG
ATCACCAATT CACGCGGCGA CATCCTGTTT GAACATGTCG ACACGCCGGC CCAGCGGGCA
ACGACGGCCG CGACCGCCCG CTCGATGTCG ACCATGTTGC AGGATGTGGT GCTGAGCGGA
ACCGGCCGGC GGGCCGCCCT GCCAGGCCGC GCCTCGGCCG GGAAAACCGG GACCAGCCAG
TCCTTCCGCG ATGCCTGGTT CGTTGGCTAT ACGGCCGATT TCACAGCCGG GGTCTGGGTT
GGCAATGATG ATGACACACC GATGGACGAC GTCACCGGCG GCGGCCTGCC GGCGATTATC
TGGCAACGCT TCATGACCCG GGTGCATCAG GACCTGCCGG TGCGGCCGCT ATCGGCCCCG
GCGCCGCGCA CACGCTCGGA ACGGGAAGAG CGGCTGGCCG CCTTCTACTC CGACCTGTCA
GCGTCCTTCT CGGTGATACT GGCTGACGGG GCTTCGCCCA CCGAGCGCTG A
 
Protein sequence
MYQEPFRADH MMERDRRTRR TRLILGGVLG SLVLLGTVLG VTGWHWAFHD LPAAPTSASE 
LWSTRREPSV TLQDRDGHVL AVRGPLYARA VALDALPEHV PQAFLAIEDQ RFYEHDGVDL
RGVFRALWVN FQAGRSVQGG STITMQLVKN LILTPDRHLR RKIQEMRLAR QLEDHLTKTE
ILELYLNRIY LGARAFGVEA AAQRYFDKPA TELTLAEAAL LAALPKAPSR LDPTVNLAAA
QARAATVLDA MLEAGFIDQA AHDAAIAEPA APVADTSDPN ATAVWGHAFD YALAEAADLV
AADVPDLVIR TTLDPALSRA AHDVIETVLD EEGEAQNAGE AAIMLLAPDG AIRAFAGGRD
YATSQFNRAI QAQRQPGSAF KPFVFAAALE AGYDPSSAVW DEPIDLEGWT PQNFSGGFRG
LVTLQEALKR SINTVAAQVA DQVGIARVVE VGQRFGIRSP LPELPAIALG AAEVNLLELT
SAYAVFGNDG ARREPYFITS ITNSRGDILF EHVDTPAQRA TTAATARSMS TMLQDVVLSG
TGRRAALPGR ASAGKTGTSQ SFRDAWFVGY TADFTAGVWV GNDDDTPMDD VTGGGLPAII
WQRFMTRVHQ DLPVRPLSAP APRTRSEREE RLAAFYSDLS ASFSVILADG ASPTER