| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0899 |
|---|
| Symbol | |
|---|
| ID | 4284064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 990671 |
|---|
| End bp | 992359 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638140367 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_756130 |
|---|
| Protein GI | 114569450 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000736499 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0870171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTCA ACCTGATCTG GCTTGGCACG CTGGCGGCTG CCTTGCCGCG GCTGTGGCCA
ATCATTGACG GGACCGCCGT CGAGAAGTCG CTGCTGGTCG CGGCCATCGC CGCGCCGGCC
CTGCTTTCCT TCATTCTCGT CCCGCGCATG GACCGCGCCT TCGAGCGTTT CCTGCTGGCG
CTGGTCTGGA CCGGCTTTGC GGTCGGCGTG ACCCTGACCG GTGGCGGTGT CACCGGGATC
GGCGTGCTGG CCTTCCTGCT GGCCCCGGCC ATGGCGGCCG CCTGCGGTGA GCGCGACGGT
GTGATCAAGG CGGCGGCCCA GTCCGGACTG GCCGCCCTTG TCATCAGCGG CCTGCAGCTG
ACCGGTTTTG TCGCGCCGGC GCCGATGGCC ATCGAATTCC ATCTGCCCTT CGTACTGGGC
TGCGTGCTCA CCCTGTCGAC CGGCTTTGCC TTTGGTGCCC TGCGTGCCGT GCATGATGCC
GACCTGGCGC GCGCCGAGGC TGAACGGGGG CGTGTCCGCG CCAAGGCCTT CGACGCCTCA
CCCGTACCGC TGGTCGCTTG CGATGCTGAC GGCCATATCC TGGCCGCCTC GCGGGGCTTG
CGTGACCTGT CGCCCGGCCT GCCGCGTGAC CTGAAGGGCC TGCCGCTGGC CGATCTCGGT
TTCGACGATG ATGACCGCGC CCAGCTGGCC GCCTCTGGCC GCCGTGCCGC GCTGCGCGAT
GTCGAGGGAC CACTCGTTGT GCGCGGGCCG CGCGGTCACA GCGAAGACGT GATCGTCAAG
ACGCGGCCCA TCCATGGCGG CTCGGTCATC ACCCTGTCCA AGGATAGTGG TCCGGCCCTG
CAGGCCGCGC TGACCCAGGC CCGGCACGAC CGCGAGGCCG CCGAAGAGGA CGCCCGCGCC
AAGTCGCAAT TCCTGGCCTC CGTCAGTCAC GAGCTGCGCA CCCCGCTCAA TGCCATTATC
GGTTTTTCCG ATGTCATGAA GGCGCGCCTG TTCGGGCCGC TGCCGGCGCG CTACGCCGAA
TATGCCGACC TGATTCATGA AAGCGGCCAG CACCTGATGG AGCTGATCGG CGACGTGCTG
GACATGTCCA AGATCGAGGC CGACCGCTAT GAGCTGGTCC GCGAGACCTT CGATATCGGG
GAAGTGGTCA ACCTGTCGGC CAAGATGATG CGCCTGCAGG CAGAAGAGGC CGGCATCAAT
CTCAAGATCA AGCGCCATGA CGGCCCGCTT CTGGTCGATG GTGACCGCAA GGCCCTGCGC
CAGATCCTGC TGAACCTGCT GTCCAATGCC GTCAAGTTCA CGCCGAAGGG CGGTGCCATC
GTGGTCATGG CCCGGGCCAG CGGTGGCCAG CTTGTGATGG CCGTCGGCGA TAGCGGTGTC
GGCATCGATC CGGAAGAAAC CGCCCGTCTT GGCCAGCCCT ACCAGCAGGC CGCCAATGCG
CGTGACATCG AAAAGCGCGG CACGGGCCTC GGCCTGTCAC TGGTTCGCGC CCTGTCGGAA
TTGCATGGCG GCTCGATGAA TATCGCCAGC CGCAAGGGCG AGGGCACCAC GGTGACCATT
TCCCTGCCCA TCCTCGCCGA AGACAAGGCC GACGTGGAAC CCCATCCCGG CCTCGACGTC
CGCCAGCAGA TCCAGCGGGC CCAGGAAGCC AGCCAGGACA TGACGGTGGT GAAGGCGGAT
GTGGCCTAG
|
|---|
| Protein sequence | MLVNLIWLGT LAAALPRLWP IIDGTAVEKS LLVAAIAAPA LLSFILVPRM DRAFERFLLA
LVWTGFAVGV TLTGGGVTGI GVLAFLLAPA MAAACGERDG VIKAAAQSGL AALVISGLQL
TGFVAPAPMA IEFHLPFVLG CVLTLSTGFA FGALRAVHDA DLARAEAERG RVRAKAFDAS
PVPLVACDAD GHILAASRGL RDLSPGLPRD LKGLPLADLG FDDDDRAQLA ASGRRAALRD
VEGPLVVRGP RGHSEDVIVK TRPIHGGSVI TLSKDSGPAL QAALTQARHD REAAEEDARA
KSQFLASVSH ELRTPLNAII GFSDVMKARL FGPLPARYAE YADLIHESGQ HLMELIGDVL
DMSKIEADRY ELVRETFDIG EVVNLSAKMM RLQAEEAGIN LKIKRHDGPL LVDGDRKALR
QILLNLLSNA VKFTPKGGAI VVMARASGGQ LVMAVGDSGV GIDPEETARL GQPYQQAANA
RDIEKRGTGL GLSLVRALSE LHGGSMNIAS RKGEGTTVTI SLPILAEDKA DVEPHPGLDV
RQQIQRAQEA SQDMTVVKAD VA
|
|---|
| |