Gene Mmar10_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0838 
Symbol 
ID4285943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp929272 
End bp930036 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID638140304 
Productsignal peptidase I 
Protein accessionYP_756069 
Protein GI114569389 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.32385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.02966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCTT TGATGAAGCG TCTTGCGGGC CGTGCGGCCG ATGAAATCAT GGAAACCGTG 
CGGTTCATCG GCGGTGTCGT CGCCGTCTGG CTGGGTCTTG TGACCTTCGG CTTTGCGGCC
TTCCACATCC CGTCGGAAAG CATGCAGCCC TCGCTGGAAG TCGGCGATCG GGTGCTGGTG
TCCAAATGGG CCTATGGCTA TTCCGTTCAC TCCCTGCCGC TGGGGATTGG CTATGTGCTG
CCCGACAGCT GGAATGGCCG CATCGGCTGG TCGCAGCCGC GCCGTGGTGA TGTCGTGGTC
TTCCGCGACG AGAACCAGAC GCCGCCGCGA AACCTCATCA AGCGCGTCAC CGGTGTGGCC
GGTGATGTGA TCGAAGTGCG CGAAGGCCGT CTCTACATCA ATGGCGAGGT CGCGCCGCGC
ATGCTGGAAG ATATCCGCAC CTATCGCGAG GACCGGACTG GCCAGCCGGT GACGGTAAGC
CATTATACCG AGATCCTGCC GGGCGATCGC GATCATCCGA TCTATGAGCG GACCGACGAT
TATCATCTGG ACGATTTCGG GCCGGTCACG GTGCGTCCGG GGACTGTCTT TGTGATGGGC
GACAATCGGG ACGCCTCCAG CGACAGCCGC GCCTCCGGCG GGCCGGGCTT TGTGCCGCTG
GAAAATGTCG TCGGCCGGGC CGAGACAGTC CTGTTCACGC TGGAAAGCTG TCGCCGCGAG
CAGGGGCTTT ATTGCCCGCG CGGCCGGGTC TGGGGCGGGC TGTAG
 
Protein sequence
MSPLMKRLAG RAADEIMETV RFIGGVVAVW LGLVTFGFAA FHIPSESMQP SLEVGDRVLV 
SKWAYGYSVH SLPLGIGYVL PDSWNGRIGW SQPRRGDVVV FRDENQTPPR NLIKRVTGVA
GDVIEVREGR LYINGEVAPR MLEDIRTYRE DRTGQPVTVS HYTEILPGDR DHPIYERTDD
YHLDDFGPVT VRPGTVFVMG DNRDASSDSR ASGGPGFVPL ENVVGRAETV LFTLESCRRE
QGLYCPRGRV WGGL