Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0820 |
Symbol | |
ID | 4284796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 914535 |
End bp | 915563 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638140286 |
Product | secretion protein HlyD family protein |
Protein accession | YP_756051 |
Protein GI | 114569371 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.495738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000581546 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGATC GCCGGTCACA ACTGGAATCT TTGAGTATAG ATCGTGATGG GGGCGACAGC TCCGGCGGCG GTGTGTCGAT TGTCACCACG CTGGTGATCG CCCTGCTCTT CGCCGCAGTT TCGGCTGGTG CGACCTGGTA TCTGACCCGC AGCACCGCGC CGGCACCGCA ACCCGTCGCT GCCGTGGAAA CACCCGCCCC CGCCGCCGAG ACGCCGGCTG AAGCGGCTGC CACACCGGCC CGCGCCACGC CGCGCAGTTC CGGCCTGGTG GCGACCGGCT ATATCGTCGC CCGGCGCCAG GCGACAGTAT CGGCCGAGAT CACCGGCCGG ATTTCCGAAC TCCTGGTCGA GGAAGGGGCC CGCGTCGAAG AGGGCCAGAT CCTGGCCCGT CTGGACGATA CCCGCGCCCG TATCCAGCTC GACCTCCTGA TCGCCCAGCG CAATGCCGCC GCAGCGCGAC CGCACTCGCT GATTGCCCAG CTGGCCGAGG CCCAGCGGGT GCTGGAACGG GCCCGCACCC TCGCCGAGCG CGAGATCGGG TCCGAAGCCG CCGTCACGGC AGCGCGCACC CAGTTTGAAA GCCTGACCGC CCAGATCGAA GCCGCCCGCG CCGACTACCA GGCCGTCGCC GCCCAGGTGC GTGCCCAGGA AGACCTGATC GACCGCCATA TCGTGCGCTC GCCCTTTACC GGCATTGTCA TCGCCAAGAA TGCCCAGGTT GGTGAAATCC TCTTTCCCGG CTCCGCCGGT GGCGGTTTCA CGCGGACCGG TGTGGCGACG CTGGTCGACA TGGAGTCGCT GGAAATCGAG GTCGATGTGA ATGAAGGCCA GATCGGTCGC GTGACGCCCG GCCAGCGGGT CGAGGCGCGC CTCGATGCCT ATCCCGACTG GCGCATTCGC GCCCATGTCG AGGCCATCAT CCCGACCGCC GACCGCGCCC GCGCCACCAT CACCGTCCGC GTTGCCTTTG ACGAACGCGA CGGCCGCATC CTTCCGGACA TGGCGTCACG CGTCATTTTC GTCGAGTAA
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Protein sequence | MSDRRSQLES LSIDRDGGDS SGGGVSIVTT LVIALLFAAV SAGATWYLTR STAPAPQPVA AVETPAPAAE TPAEAAATPA RATPRSSGLV ATGYIVARRQ ATVSAEITGR ISELLVEEGA RVEEGQILAR LDDTRARIQL DLLIAQRNAA AARPHSLIAQ LAEAQRVLER ARTLAEREIG SEAAVTAART QFESLTAQIE AARADYQAVA AQVRAQEDLI DRHIVRSPFT GIVIAKNAQV GEILFPGSAG GGFTRTGVAT LVDMESLEIE VDVNEGQIGR VTPGQRVEAR LDAYPDWRIR AHVEAIIPTA DRARATITVR VAFDERDGRI LPDMASRVIF VE
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