| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0818 |
|---|
| Symbol | |
|---|
| ID | 4284794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 912585 |
|---|
| End bp | 913742 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638140284 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_756049 |
|---|
| Protein GI | 114569369 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.000614267 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATC TCACGCTGAT CCGGAAGAAC CTCTTCCGCA AAAAGCTGAG GGCGATCCTG
CTGACCCTGT CGATCCTGAT CGCCTTTTTG ATCTTCGGCG TGCTCGGCGC CTTCTATTCG
GTCTGGACAT CGGGCGGGGC CGTGGCGGCT GACAACCGGC TGATCACCGT CAACCGGATC
AATTTCACGG TCTCGATGCC CTACGCCTAC TGGACCCGGG TTTCGGCCCT CGATGGCGTT
GACAATGTCA GCCAGGCCAA CTGGTTCGGC GGTTATTACC AGGACCCCAC CCAGCAGGTT
CAGACCTTTG CCGTCGACCC GGAGACCTAT CTGACGGCCT ATCCGGAACT GACAATGCCG
GCGGAGCAAC GCCAGGCCTT TCTGGAGACC CGCGACTGCC TGCTGGTCGG GACCGATCTG
GCCGCCATGT ACGGATGGTC GGTCGGCGAT ACCATCCCGC TCCTGTCCAA TATCTGGCAA
AAGACCGATG GCTCGGCGAG CTGGGAATTC AACATCTGCG CCATCTTCGA CGCCGAAGAC
GACAAGGTGC CGGCCAATTA CGCCCTGTTC CACTACGACT ATTACAACGA AGCACTGGCC
TTCAACACCG ACCAGGTCGG CTGGCTGATC ATCAACACAA CCGACGCGTC GCTGAACGAA
CAGGTGTCAC GGGCGGTCGA TGAGATGTTC GCCAACTCCC CCGCCGAGAC CGAAACAACC
ACCGAGGCCG CCTTCAATGA GGCCTTTGCC AACCAGTTCG GCAATATCGC CCTGATCCTG
CTATTCGTGG TCGGCTCGGC CTTCACCACC ATCCTGATCA TTGTCGGCTT CACCATGGTG
ACCGCGATCA ATGAGCGCAC CGGCGAGATT GCCGTGATGA AAACCCTCGG CTTCCCGGCG
CCACGCATCT TCCGCATGGT GCTCGCCGAG TCGGTCATGC TGAGCCTGGT CGGTGGTTTG
CTCGGGCTTG GCCTGGCCCA TCTGTTGATC AATGCGGTCG CCGGCTTCCT GGCGGCCTTC
CTGCCCGGCT TTGCCCTGTC GGCCATGGTC TTCTGGGGTG GGGTGGGACT GGCTGTCCTG
CTCGGCCTGC TCACCGGGAT TGTCCCGGCC ATCAATGCCC AGCGCGTGAA GATCATCACC
GCGCTCAGCA ATCAATAG
|
|---|
| Protein sequence | MNDLTLIRKN LFRKKLRAIL LTLSILIAFL IFGVLGAFYS VWTSGGAVAA DNRLITVNRI
NFTVSMPYAY WTRVSALDGV DNVSQANWFG GYYQDPTQQV QTFAVDPETY LTAYPELTMP
AEQRQAFLET RDCLLVGTDL AAMYGWSVGD TIPLLSNIWQ KTDGSASWEF NICAIFDAED
DKVPANYALF HYDYYNEALA FNTDQVGWLI INTTDASLNE QVSRAVDEMF ANSPAETETT
TEAAFNEAFA NQFGNIALIL LFVVGSAFTT ILIIVGFTMV TAINERTGEI AVMKTLGFPA
PRIFRMVLAE SVMLSLVGGL LGLGLAHLLI NAVAGFLAAF LPGFALSAMV FWGGVGLAVL
LGLLTGIVPA INAQRVKIIT ALSNQ
|
|---|
| |