Gene Mmar10_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0806 
Symbol 
ID4286690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp901820 
End bp902248 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID638140272 
Producthypothetical protein 
Protein accessionYP_756037 
Protein GI114569357 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0040933 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00739543 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGGCCCG TCATTGTCGA CGCCTCGGTC GCTGTTAAGC TCTTCCTGCC GGTTCCCGGG 
TATGAAAAGG CGATCGCCGC AGCCCACATG TTTGAGCTGC AGGCGCCGCG CCTCATTTTC
GCTGAAACGG GCAATGCGCT CTGGCAATAT GTCCGCCACA AGCAGACCAC GGTCGAAGAT
GCCTCGACGG CCTTGCTCAA GCTCGCCGGT CTTGTGGCGC AGCCCGACGA AACGGGCCTG
GCGGCGTTGG CCGTGGAAAT GGCCTGCGAA CTGGACCACC CGGTCTATGA CTGTACCTAT
CTCGCCCTCG CCAATCGGAA TCATCGCCCG ATACTGTCTG CCGACAAATG CATGCTGTCT
CTCGCCCGCG ACCGTCTTGG CCTTGAAACC ATTCCGCTCG ACAGCATAAA CCCGGAGCCA
TCCTCGTGA
 
Protein sequence
MRPVIVDASV AVKLFLPVPG YEKAIAAAHM FELQAPRLIF AETGNALWQY VRHKQTTVED 
ASTALLKLAG LVAQPDETGL AALAVEMACE LDHPVYDCTY LALANRNHRP ILSADKCMLS
LARDRLGLET IPLDSINPEP SS