| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0793 |
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| Symbol | |
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| ID | 4284430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 889162 |
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| End bp | 889833 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638140259 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_756024 |
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| Protein GI | 114569344 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0072267 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGGTG ACACGCCCCG CCCTTTCGTC TATTCGCCGC CGCCCGCCGG CGCGCTGCCG
GTTATCCATG CCGACGATCA CATCCTGGTT GTCGACAAGC CGTCCGGCCT GCTCACCGTG
CCCGGTAACA GGCCGGAGCG CGCTGACTGC CTGGAAGCGC GGGCCCGTGC TGAATTCCCG
ACCGCGCGTA TCATCCACCG CCTGGACATG GACACGTCCG GGGTCATCGT GCTGGCCCTG
ACAACGCATG CCCAGGCACA TATCGGCAAG CAGTTCGAAA AACGGATGAC GTCCAAATCC
TATGTCGCGC GCGTCCAGGG CGAGATGACC GGCCGGTCCG GCCGTGTTGA CCAACCCATC
ATCACTGACT GGCCCAACCG GCCAAAACAG ATGATTTGCC ATGACCGTGG CCGCAACGCC
GTGACCGATT GGGAGGTGAT GGACATCGCC GACGGCGTGA CCCGCGTGCG CCTGTGCCCG
CTGACCGGAC GCAGCCACCA GCTACGCGTT CACATGTTGT TTCTGGGCCA CCCGATACTG
GGCGACAATC TTTACGCGCC GCCCGCGGCG CTGACAGCCA GCGATCGCCT GTGCCTGCAC
GCGCAGCAGC TGGGTTTCCG CCATCCCGAT GGTGGCGCAC CGGTGAGCTT TGAAAGCCCC
GCTCCGTTTT GA
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| Protein sequence | MPGDTPRPFV YSPPPAGALP VIHADDHILV VDKPSGLLTV PGNRPERADC LEARARAEFP
TARIIHRLDM DTSGVIVLAL TTHAQAHIGK QFEKRMTSKS YVARVQGEMT GRSGRVDQPI
ITDWPNRPKQ MICHDRGRNA VTDWEVMDIA DGVTRVRLCP LTGRSHQLRV HMLFLGHPIL
GDNLYAPPAA LTASDRLCLH AQQLGFRHPD GGAPVSFESP APF
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