Gene Mmar10_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0780 
Symbol 
ID4284417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp877205 
End bp879529 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content63% 
IMG OID638140246 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_756011 
Protein GI114569331 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00413354 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0431838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA CGCCAGCCGG CGATAGCTAT CTTCGGACAT CCACGGGCGA TGACGAGCCG 
AAATCGGCCC TTCAGCGCCT GACCGATACC GATGGTTGGG TGGGGCAGGT CCTGCCCGGC
CTGGTGGCTG TAACCTGCAT TTTCATCGTC GCCCTCGCGG TCATGGCCGG GGAAGGGCGC
TTGATGTCGT CCGCCCGCGA AACCAATCTG CGAACCCTGG AAACCGTTCT GCGGAATACC
CGGCAACGCT TCGAGCTGTG GGCTCAGTCG CGTGAGAATG ATGCGCGTGT CTGGGCCGAG
AATGGTCGTG TGCAGGCGGC CCTTGAAGAG CTGGCGAGCC TGCCCGTACC CGCTGCGCTG
GCTGCCTCTC CGCAACAGGA GTGGATGCGC GACACTGTGG GCCCGTGGCT GACAGAATAC
GGCTATCGGG GCTTCACCCT GATGGCCCCC AACGGGTCGA CGCTGGCTTC CATGCGCGAT
GACGATCTCG GCCAGCCATC ATTGGTGCTC GATCTGGTCA ATGCCAGCCG GCTGGCGTCG
GCCGGCGTTG TTTTGACCCG TCCGCATATC GTCGACGTGA TTGATTCCAC CGACTCCGCC
GCCAGGGCGG TAGACGAGGA AATCCTCATG TACGCCGTTG CCACGGTTCG CGATGGCGAC
GAGTTGTTGG GGTATCTGGC GCTGCGGATC GATCCCCTGT CCGAATACAC GGCGACATTC
CGGGTCGGCC GGACCGGCGT GTCCGGCGAA ACCTTTGCCA TCGACAGTGA AGGGCGTCTG
CTCACCGAAA CCCGCTATGG CGAGGAATTG GTCGAAGCCG ACCTCCTGGT CGCCGGTCAT
CCGTCGATCC TGCACGTCGA GATCCGCGAT CCGGGCGTCG ATGTCACCAT GGGCGGCATT
CCGGCCCGTC CCTATGCCGA CTGGCCCCTG ACCGAAGCGG CGCTCGGTGT GACAACCGAA
GGGCAGGGTC ACAACCTGCA AGGCTATCGC GACATGCGCG GTGTGCTGGT GATGGGCGCC
TGGGATTGGG ATCCGGCCCG CGATATCGGC ATCATCACCG AGGTTGAACT GGGTGAGGCC
ATGGCTGGCG CCAACCAGGC ACGGGCGGTG CTCCGGGTCT TTGCCGTCGC CATGGCCCTG
TCCTTCATAT TGCTGGCGGT GCTGTTCAGC GCCCATCGGT CAATCACCCG CCGCAGGGCG
CTGGCGACGC ATGAGGCCAA TCAGCGCCTG TCGCAAATCC TGATGACGGC CGCGGAAGGG
ATTTACGGCA TCGATGGCGA TGGCGTGGTC ACATTCATCA ACCCGCGTGC CTGTTCGATG
CTGGGTTATC GAGAAGACGA GCTTATCGGC AAGACCATGC ATGCCATCGT GCATCATTCG
CGTCGCGACG GTTCCTTGTT CCCGCGCGAA GAATGCTCGA TCCATTGCGC CGGCGTTCCG
GCGGAATCGC CGGATGGGGA CGTGTTCTGG ACCAAGAATG GCCAGCCCAT CCCGATCGAG
TCGGCCTCCT CGCCGATCGA CCCGAACGAC AAGTCCATCG GTGCGGTGGT GACCTTCCGG
GATGTCACAA ATCGCAAGCG CGACGAGCTG GCCCTGCGCC GCTATGCCCA GGAACTGAAG
CGCTCCAACT CCGAATTGCA GGAATTCGCC TACGCCGCTT CACACGATCT CCAGGAGCCG
CTGCGCAAGA TCCAGGCCTT TGGCGAGCGC TTGAACAACA AGTGCTATGA CGCGCTGGAC
GAAACAGGGC GGCACTATCT GGAACGCATG GTCGACGCCT CGACCCGCAT GCGGCGACTG
ATCGATGACC TGTTGAGCTA TTCGCGGGTC AATTCGAAAA CCACCAATTT CCTGGCAGTC
GACCTGTCGG CTGTCGTTGC CGATGTCCTG TCCGACCTCG AGCCGCGGAT TAACGCTGAA
GAGGCCAAGA TTCGGGTCAG CGACCTGCCG GCCATCGAGG CCGACCCGGG CCAGATGCAC
CAGCTCTTCC TCAACCTGCT GGCCAATGCC CTGAAATTTC GCAGGCCTGG CGTGCTGCCA
TCGATCTCGA TCGAAGGCAG CGTTGAAGTG GGCGAGAATG GCGCCATGGC GCGCATCGCC
GTGGCCGACA ATGGTGTCGG ATTCGAGCCG CGCCATGCCG AACGGATTTT CGGCATGTTC
GAGCGTCTGC ACGGTCGGGA CGAATTTGAC GGGACCGGGG TGGGTCTGGC CACCTGCCGC
AAGATCGCGG AACGTCATGC CGGCGAATTG ACGGCCTGGG GCGAGCCGGA TGCCGGTGCC
GTGTTCACAC TTCTCCTGCC GGTCCGGCAG GGCAGTGCAA TGTAG
 
Protein sequence
MNTTPAGDSY LRTSTGDDEP KSALQRLTDT DGWVGQVLPG LVAVTCIFIV ALAVMAGEGR 
LMSSARETNL RTLETVLRNT RQRFELWAQS RENDARVWAE NGRVQAALEE LASLPVPAAL
AASPQQEWMR DTVGPWLTEY GYRGFTLMAP NGSTLASMRD DDLGQPSLVL DLVNASRLAS
AGVVLTRPHI VDVIDSTDSA ARAVDEEILM YAVATVRDGD ELLGYLALRI DPLSEYTATF
RVGRTGVSGE TFAIDSEGRL LTETRYGEEL VEADLLVAGH PSILHVEIRD PGVDVTMGGI
PARPYADWPL TEAALGVTTE GQGHNLQGYR DMRGVLVMGA WDWDPARDIG IITEVELGEA
MAGANQARAV LRVFAVAMAL SFILLAVLFS AHRSITRRRA LATHEANQRL SQILMTAAEG
IYGIDGDGVV TFINPRACSM LGYREDELIG KTMHAIVHHS RRDGSLFPRE ECSIHCAGVP
AESPDGDVFW TKNGQPIPIE SASSPIDPND KSIGAVVTFR DVTNRKRDEL ALRRYAQELK
RSNSELQEFA YAASHDLQEP LRKIQAFGER LNNKCYDALD ETGRHYLERM VDASTRMRRL
IDDLLSYSRV NSKTTNFLAV DLSAVVADVL SDLEPRINAE EAKIRVSDLP AIEADPGQMH
QLFLNLLANA LKFRRPGVLP SISIEGSVEV GENGAMARIA VADNGVGFEP RHAERIFGMF
ERLHGRDEFD GTGVGLATCR KIAERHAGEL TAWGEPDAGA VFTLLLPVRQ GSAM