| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0686 |
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| Symbol | fliF |
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| ID | 4284838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 786388 |
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| End bp | 788043 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638140151 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_755917 |
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| Protein GI | 114569237 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.54488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCGC TTTTTGAACA GTTCAGGGCT TTCGGGGCCG GGCGGCTGAC CGCGATCTTC
GGTCTGGCCG TCGGTGTTGC CGCCGCGCTC ATGTATTTTT CCGGCGCGAT GGGCGGTGCC
AGCCAGTCCC TGCTCTATTC CGGGCTGGAC CCGTCGGAAG CAGTCGCGAC CTCGCAACTG
CTGGACCAGG CGAACATCCC CTATGAAATC CGCGAAGGCG GGACGGCCAT CTATGTCAAC
CGTGACCAGG TTGATGAAGC GCGCGTGCGG GTGGCCTCGA ACGGCCCGCT CAGCGGCGCG
TCGGTCGGCT ATGAAATCTT CGACCGCCAG GACAGCTTCG GCCAGAACAG CTTCGTCCAG
AACCTCAATG CCAAGCGCGC CACGGAAGGC GAGTTGGCGC GGACAATCCA GTCCCTCAAC
TATGTCAATT CCGCCCGCGT CCACCTGAAC CTGCCCGAGC GCCGCCTGTT TTCGCGCGAC
CAGCAGTCGC CGACCGCCGC CGTCACCATC TCGACCGCCG GTCGCCTGAA CTCCGAGCAG
GTCCGGGTGA TTCGCAATAT CGTCGCTTCC TCCTCCGGGA TCGCGCCGAC CGGCGTCTCG
ATTGCCGATG ATCGCGGTCG CCAGCTGGCC AGCGGGTCGG ATGGCCAGTC GGCCGGGTCG
ATGATCATGG ATGAACGCCG CGGTGAGATC GAAGCCCAGC TGCGCCAGAA TATTCTCGAT
ATCGTCGAAG GTGTCGTCGG CGCCGGCGCG GCCCGGGTCC AGGTCAATGC CGAGCTGGAC
CGCCAGAGCA TCACGCAAAG CTCTGAAACC TATGACCCGA ATGGGGCCGT TATCCGCTCT
CGTGAACGCG GCGAAGACCT CTCCAACGAT CAGGACGGCG CCAATCAGAA CCGCGTCTCG
GCATCGGAAA ACCTGCCGGA TGCCGGTGAC GGCGCGGGGG CTGAAGGGTC GGGCAGCCGC
TCCAATCGCG AGAGCACGAG CGAGCGGGTC AATTACGAGA TTTCCTCGAC CACCCGCACC
GAGATCATCG AGGCCGGCGC CATCAATCGC CTGTCGGTTG CCGTCGCTGT CGATGGCGTA
CTGGAAACAG CCGAGGACGG CACGGTTACC TGGCGTGAAC GGCCGCAGTC CGAGATCGAC
CGCATCGAAG CATTGGTCCG CTCTGCCATG GGTTTTGTCA GTGAGCCGGG TGTCCGCCAG
GATCTGCTGA CCGTCAGCCA GATCGAATTC GCCCGCACCG ACCCGCTGCT GGGAACGGCC
GCTGCAAGTG GCATGTCCTT CTCGAAGAGC GACATCATGC GGGCTGCCGA GATCGGCGTC
ATGTTTGTCA CGGCGTTGCT GATCATCTTC CTGGTCGCCC GTCCGCTGGT CAAAGGCGCG
AGCGGCATGG CCATGCCACA GGGCCTCGCC CTGGCTGGCG CCGGCATGGA TGGCGCAGTT
GCCGGGGCCC CGGCTCCCAC TGCCCTGCCA AGCCAGCCCA ATCGTCCCGT CGCCCTGCCG
TCGGCCGGTG GCGCGGGCGG GCGCGAGGAC TCCATCGACA TCGAGAAGAT CGATGGCCAG
GTGAAAGCGT CGTCGCTGAA GAAAGTCGCC AATATCGTTG AATCCCATCC GGAAGAATCG
ATCTCGATCC TCCGGACCTG GCTGCACGAG AGCTGA
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| Protein sequence | MNALFEQFRA FGAGRLTAIF GLAVGVAAAL MYFSGAMGGA SQSLLYSGLD PSEAVATSQL
LDQANIPYEI REGGTAIYVN RDQVDEARVR VASNGPLSGA SVGYEIFDRQ DSFGQNSFVQ
NLNAKRATEG ELARTIQSLN YVNSARVHLN LPERRLFSRD QQSPTAAVTI STAGRLNSEQ
VRVIRNIVAS SSGIAPTGVS IADDRGRQLA SGSDGQSAGS MIMDERRGEI EAQLRQNILD
IVEGVVGAGA ARVQVNAELD RQSITQSSET YDPNGAVIRS RERGEDLSND QDGANQNRVS
ASENLPDAGD GAGAEGSGSR SNRESTSERV NYEISSTTRT EIIEAGAINR LSVAVAVDGV
LETAEDGTVT WRERPQSEID RIEALVRSAM GFVSEPGVRQ DLLTVSQIEF ARTDPLLGTA
AASGMSFSKS DIMRAAEIGV MFVTALLIIF LVARPLVKGA SGMAMPQGLA LAGAGMDGAV
AGAPAPTALP SQPNRPVALP SAGGAGGRED SIDIEKIDGQ VKASSLKKVA NIVESHPEES
ISILRTWLHE S
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