| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0672 |
|---|
| Symbol | |
|---|
| ID | 4284824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 769532 |
|---|
| End bp | 771616 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638140137 |
|---|
| Product | TonB-dependent heme/hemoglobin receptor family protein |
|---|
| Protein accession | YP_755903 |
|---|
| Protein GI | 114569223 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.41127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG TATTTCTGGC CTCGACGGCC CTGTTCGCCC TTGCCACCCC GGCCTTCGCC
CAGACCGCCA GCGAAGAGAC GTCCGAAGAC GTGATCATCG TCGAGACCAC CTATACCGAG
CTGGACCGCT TTGTTTATCC AGGCGCCACG GCCACGGTTG ATGCCGAGGC CCTCGACCTG
TCCCGCCCCT CCGATCTGGA TGACCTTCTG CGCCAGCTTC CGGGCGTCGA CGTGTCCGGC
GGCCCGCGCC GTACCGGCCA GACGATCTCC CTGCGCGGTC AGGGTCGCGA GAACACCACC
CTCCTGCTGG ATGGTGCCCG CCAGAATTTC GGCTCGGCCC ATGACGGTGT CTTCTTCGTC
GATCCGGCCC TGCTGGTCGG AGTCGAAGCC GTGCGCGGGC CGGCCTCGGC CCTGTTCGGT
TCCGGCGCCT CGGGCGGCGT CATCGCCTTC CGCACCGCCA GCGCCGATGA CCTTCTGGGT
AATGGCGAGA GCTGGGGCTA TGGCCTCGGT GCCGGCTACC GCTCGGTGGA TGAGGAGCAG
CGCGGCTCGG TCAGCCTGTA TGGCCGCACC GGCCAGTTCG ACGTCCTCGC CTCGATCTCC
TCGCGCCGCT CCGGTGATAT CGCGCTGGGT TCGGGCAATG ACCTGCCCGC CGATGATGAG
AGCATTTCCG GCCTGTTCAA GCTGGGCGCC GATCTCGCTG ATGGTATCCG GGCCGAGCTG
AGCTGGCAGA CCTTCGAGGG CAGCGCCATC GAACCCAATA ACGGCCAAGG CGCCGGCGCG
GTCGGGGCCT TCAACGCCCT CGTCGACAAG GACATTACCT CCGACGCGAT CACCCTCAAC
ACCACCATCG CCCCGTCCAC GATCAGCTGG CTCGATCTCG ATGTCACCGT TTATCGCAAC
GAAACCGGCG TCGATGAGAC CGAGACCGGC ACCGGCCGCG AACTGCGTCG CGATCTGGAA
ACCAATGGCA TCCGTCTCGA CCAACGGTTT GACTTCACTC TCGGTGCCTT TGATGCCGGC
CTGACAATGG GCGGTGAATA TTATGAGGAT ACGCAAGACG GCTATGACAG CGCCGACACG
AGCGGCGTGC GCGGCGGTGC ACCCGATGCG GCCAGCCGGT TCACTGCCGG CTGGATGCAG
CTGGAGCTGG ACGGACCGGC TCCGCTGGGT TTGCCAGGCC GGCTGATCCT GCTTCCGGGC
GTGCGCCAGG ACAGCTTCGA GACCTCAACC CCGACCACGG CGACCGTCTC CAATGACGCC
ACGTCCAGCC GTCTCGCCGC GACCTATGCG CCGATCAATG ACCTCAATGT CTTCGTCAGC
TGGGGCGAGG CTTTCCGGGC ACCGTCGATC AACGAGCTTT ATCTGGACGG CACGCACTTC
TCGCTGCCGC ACATCATCCT CGGGCCGCCG ACCTTCATCT CGAACGAGTT TATCGCCAAT
CCGGACCTGC TGCCGGAGGA AACCGAGACA CTGGAGATCG GCGTCCGTAT CGACCTCTCC
GACCGGGTCG ATCTGGACCG GCTCGACATG AGCGCGTCCT GGTACCAGAC CGATGCGGAA
AACCTGATCG ACCTGTTCGT CGATTTCGCC TTCGACCCGA CCTGTTTCGC ACCGCCCTTC
TTCGCCCCCT GCTCGGCCGG CACGACGCAG AGCCGCAATG TCGGCGCGGC GGAGCTGGAA
GGCTATGAAA TCCAGCTTGG CCTCGCCGAA GGCCCATTCT CGCTGGACGC CTCACTCACA
GGCATTGACG GCAAGGACGT CGCCACCGGC GATCCGCTCG GCTCGCTCGC TCCGACCCGT
CTTTTCCTCG ATGGCCGCTG GCGTTTCGAC GAGACCCGCC TGACCCTCGG TGGCCGCATC
GAGGCCGCCG GCGAGTATGA CGAACCACTC GCAACCAGCG AACACCGGCC CGGATACATT
GTCGCCGACG CCTATGCCCG CTGGCAGCCC ATCGCCGATA GCGGCTTGCG GATCAATGCC
GGCGTCGAAA ACCTGTTCGA CCACGACTAT GACCGCGTCT TTGCCGGTGT CAGTGAACCG
GGCCGCTCGG TGCGCCTTGA TGTGAGCTGG TCTCAGAACT TCTGA
|
|---|
| Protein sequence | MKRVFLASTA LFALATPAFA QTASEETSED VIIVETTYTE LDRFVYPGAT ATVDAEALDL
SRPSDLDDLL RQLPGVDVSG GPRRTGQTIS LRGQGRENTT LLLDGARQNF GSAHDGVFFV
DPALLVGVEA VRGPASALFG SGASGGVIAF RTASADDLLG NGESWGYGLG AGYRSVDEEQ
RGSVSLYGRT GQFDVLASIS SRRSGDIALG SGNDLPADDE SISGLFKLGA DLADGIRAEL
SWQTFEGSAI EPNNGQGAGA VGAFNALVDK DITSDAITLN TTIAPSTISW LDLDVTVYRN
ETGVDETETG TGRELRRDLE TNGIRLDQRF DFTLGAFDAG LTMGGEYYED TQDGYDSADT
SGVRGGAPDA ASRFTAGWMQ LELDGPAPLG LPGRLILLPG VRQDSFETST PTTATVSNDA
TSSRLAATYA PINDLNVFVS WGEAFRAPSI NELYLDGTHF SLPHIILGPP TFISNEFIAN
PDLLPEETET LEIGVRIDLS DRVDLDRLDM SASWYQTDAE NLIDLFVDFA FDPTCFAPPF
FAPCSAGTTQ SRNVGAAELE GYEIQLGLAE GPFSLDASLT GIDGKDVATG DPLGSLAPTR
LFLDGRWRFD ETRLTLGGRI EAAGEYDEPL ATSEHRPGYI VADAYARWQP IADSGLRINA
GVENLFDHDY DRVFAGVSEP GRSVRLDVSW SQNF
|
|---|
| |