Gene Mmar10_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0554 
Symbol 
ID4286455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp648420 
End bp649487 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content68% 
IMG OID638140019 
Productaminotransferase, class V 
Protein accessionYP_755785 
Protein GI114569105 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.721131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.00373299 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTCCGA TGCCAAAGTC GGCCATCGCC GCCGGACAGG ACAGCTATGC CCGCAAGGGC 
CAGCCCTGGC GCTATCAGGT CCAGGCGGAC TTCTTCGACG CGCCCGAGGA GCTGCGGGCC
CGGGCCGCGC GCCTGTTTGG CGCCACGGCC AATGACATCG CCCTGGTTCC CGCCGCGTCC
TACGGATTGG CGACAGCCGC GCGAAATCTC GCCCCCGATG CCAAGAGTGA AATCCTGGTG
CTGGCCGAGC AATTCCCGTC GAACGTCTAT GTCTGGCGCG ATCTCGCGGC CGAACAGGGC
GCGCATGTCC GCACCGTCTC CCGGTCCGAC AATCAGAGCT GGACCGAGGC CATGCTGGCC
GCAATCTCAC CCGCCACATC CATCGTCGCC TGCCCCCAGG TTCACTGGGC CGATGGCGGC
GCACTGGATC TCGCCGCGAT CAGCGACGCG GCCCGGCGAC AGGGCGCGGC CCTGGTGCTC
GACCTGACCC AGTCGCTGGG CGTGATGCCC TTTGACCTCG CCGCCATCCA GCCCGATTTC
GCCGTCGCCG CCAGCTATAA ATGGCTGCTC GGACCCTATG CGATGGGCTT TCTCTATGTC
GCGCCCCACC ATCAGTCGGG TGAGCCGCTG GAGCAGAACT GGATCGTGCG CGACCGGGCC
GAGGATTTTG CCCGCCTGGT CGACTATGCC GACGCCCATG CGCCCGGTGC CCGTCGCTTC
GACATGGGCG AGCGCTCGAA TTTCCAGCTG GTCCCTGCCG CCTCGGCGAG CCTGTCGGCC
ATGCTGGACT GGGGCACAGA TGCGCTCGCC GCCACGCTGG GCCAGGCCAA TCGCCAACTC
GCCGACCGGC TGGCGCCGCT GGGCCTGCGC GGGACAACGC CCAACCGGGC GCCGCACTAT
CTCAGCCTGT CCCTGCCGGA CGGCGCGCCC GCCGATCTGA CCGCCCGACT GGCCGCGCAG
GACATTTATG TCTCGCAACG CGGCGACCGG ATGCGCATCA CACCCCATGT CTATAATGAT
GAGGCAGACT TCCAGCGCTT CGCCTCTGTA CTGGAAACGC TGCTGTGA
 
Protein sequence
MGPMPKSAIA AGQDSYARKG QPWRYQVQAD FFDAPEELRA RAARLFGATA NDIALVPAAS 
YGLATAARNL APDAKSEILV LAEQFPSNVY VWRDLAAEQG AHVRTVSRSD NQSWTEAMLA
AISPATSIVA CPQVHWADGG ALDLAAISDA ARRQGAALVL DLTQSLGVMP FDLAAIQPDF
AVAASYKWLL GPYAMGFLYV APHHQSGEPL EQNWIVRDRA EDFARLVDYA DAHAPGARRF
DMGERSNFQL VPAASASLSA MLDWGTDALA ATLGQANRQL ADRLAPLGLR GTTPNRAPHY
LSLSLPDGAP ADLTARLAAQ DIYVSQRGDR MRITPHVYND EADFQRFASV LETLL