| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0552 |
|---|
| Symbol | |
|---|
| ID | 4286453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 646599 |
|---|
| End bp | 647408 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638140017 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_755783 |
|---|
| Protein GI | 114569103 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00628299 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATA CGGAACCAAA GGGCCGGGTG CTCATCATTG CCGGCTCGGA TAGTGGCGGC
GGGGCTGGCA TCCAGGCCGA CATCAAGGCG GTGACCGCCA TGGGCGGGTT TGCGGCCACT
GCGATTACCG CCATCACGGT CCAGAACACG CTTGGCGTCA GCGCCATCCA CCCGGTCCCG
CTGGATATCA TCAAGGGTCA GATCGACGCC GTCCTGTCGG ATATCGGCGC CGATGTGATC
AAGACCGGCA TGCTGGGGAC ATGTGAGATC GTGACCTTGG TCGCCGATTG TCTGGCCGCC
TGTGAGGTTC CGATCCCGCT GGTGCTGGAC CCGGTCATGG TGGCGACCTC CGGTGACCTG
CTGGTGGATG AGGGGGCGCA GGCCGCGATC CGCGACCGCC TCTTGCCGAT GGCCACGCTG
GTCACACCGA ATATCCCCGA AGCGGAAAAA CTCACCGGCC TGGCGGTCAC GGACATTGCC
GGCCAGCTGG AAGCGGCCAA TCGCCTGATC GAAATGGGCG CGCGTGCGGC ACTGGTCAAA
GGCGGACATC TGAAAGGTCA GGCCGTGGCC GATGTGCTGG TCTCGACCCG CGGCATGGAA
TTATTCGACC GCCCGCGCCT GCCTGGTCGC AATACGCACG GAACCGGCTG CACGCTGGCT
TCGGCCATCG CCGGGCTGCT GGCCGATGGC GCACCGCTGC ATGATGCCGT GCGCCGGGCG
GGGGATTATC TGCATGAGGC CATCGCCCGT GCCCCCGGTT TCGGAGCCGG CCACGGCCCC
GTCAATCATG CCTGGGTGAC GCGGCCCTGA
|
|---|
| Protein sequence | MDDTEPKGRV LIIAGSDSGG GAGIQADIKA VTAMGGFAAT AITAITVQNT LGVSAIHPVP
LDIIKGQIDA VLSDIGADVI KTGMLGTCEI VTLVADCLAA CEVPIPLVLD PVMVATSGDL
LVDEGAQAAI RDRLLPMATL VTPNIPEAEK LTGLAVTDIA GQLEAANRLI EMGARAALVK
GGHLKGQAVA DVLVSTRGME LFDRPRLPGR NTHGTGCTLA SAIAGLLADG APLHDAVRRA
GDYLHEAIAR APGFGAGHGP VNHAWVTRP
|
|---|
| |