| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0477 |
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| Symbol | |
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| ID | 4284166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 560582 |
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| End bp | 561997 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638139941 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_755708 |
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| Protein GI | 114569028 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.392731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC GTTTGTTAGT AATCGCCACC GCGCTGGCCA CCGCCTCCTG CAGCACCCTG
CAGGCGTTCG AGACCCGCGA CTTCAGCGCC GAGGGCACTT TGCCAACAGC GCCGGTCGCG
TGGTCAGCCG GAAGCGGCGA CGCCGGTGCC GAGCTGGCCC GTGACTGGGT CGCATCAATG
CAGGATGAGC GACTGACAGC GCTGATCGAC GCGGCCTTTG CCGGCAATCC GACGCTCGCC
CAGTCTCTCG CCCGCTTCCA CGGCGCCCAG GCGGCGGCCC GGGTCGACGG CGCTCGCTAT
ATGCCCCAGC TCGACGCCAG CGCCAGCTAT CAGCGCTCGC AGCCGAATGT CGGTTCCGGC
TCGAACAGCT ACGGCCTCGG CCTCTCCGCC TCCTGGGAAT CCGATTTGTG GGGCGCCCTG
CGCGACAATG CCCGAGCCAG CGGACTCAAC GCCGATGCGG CCGCGGAAGA CCTGCGCGCT
GCCCAATTGT CCATTGCCGG CCTGGTGGCC AAGGGATGGT TCTCACTGAT CGAGGCCCGC
CTGCAGACCG AACTCGCCGA ACGCGATGTG GCGACGCGCC AAAGCTCTCT TGATCTCACG
GAGCGGCGCT TCGCCCGCGG GCTGGTTCGC AGTTCCGACG TGCGGACCGC ACGCAGTGCG
CTGTCGTCCT CGGAAGCCGC ACTGGCGTCC CGGCAACGCG CCGAGGCGGC GTCGGCCCGC
AGCCTGGAAA CATTGCTCGG TCGCTACCCG TCTGCCTCCT TGGCCCCGGA AGCCGACTTC
CCGGCCTTTG ATGAGCTGGG CGGTCTGGGC TCGCCGGTTG ACCTGCTCAC CCGGCGCCCT
GATGTCCGCG CCGCCGAGGA TCGCCTCGAT GCTGCCGGCC TGCAGTCGCA AGCTGCCGCC
AAGGCGCTCA TCCCGAGCCT GTCCCTGCGC GGTTCGTCCG GCACCGGCGG TCTCGATGTG
GCCGACATGT TCGACCTCGA CACCCTGGTC TCCAGCCTGA CGGCCTCGCT GGTCGCACCG
ATCTTTGACG GTGGCAGCCT GATCGCCCAA CGCGACCAGG TCTACGCCAA CGCCGAAGGC
CTGGTTGCCA GCTATGTCGC AACCGTCCTC ACCGCCTGGC AGGAAGCCGA AAACGCCATT
CATGGTGACG CCATCCTGGC CCAGCGGGTC GAGAATTTGC GCGAAGCCTA TGAAGAGGCC
GCAGCGGCGG AGGACCTTGT CATCCGCGAG TACGCCCGCG GCGTATCCAC AATCTTTGAA
TTGCTGACCG CGCAGTCGCG CCGGATCAGC GCTGAAAGCC AATACATCTC GGCGCGTCGC
GAACGCGCGA CCAATCGTGT CGATCTTTAC CTCGCCCTCG CCGGCGATTT CTCCGCGGCC
CAGTCCGCAG ACCCGGCCGC GCAGACAGGA GAATAA
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| Protein sequence | MAKRLLVIAT ALATASCSTL QAFETRDFSA EGTLPTAPVA WSAGSGDAGA ELARDWVASM
QDERLTALID AAFAGNPTLA QSLARFHGAQ AAARVDGARY MPQLDASASY QRSQPNVGSG
SNSYGLGLSA SWESDLWGAL RDNARASGLN ADAAAEDLRA AQLSIAGLVA KGWFSLIEAR
LQTELAERDV ATRQSSLDLT ERRFARGLVR SSDVRTARSA LSSSEAALAS RQRAEAASAR
SLETLLGRYP SASLAPEADF PAFDELGGLG SPVDLLTRRP DVRAAEDRLD AAGLQSQAAA
KALIPSLSLR GSSGTGGLDV ADMFDLDTLV SSLTASLVAP IFDGGSLIAQ RDQVYANAEG
LVASYVATVL TAWQEAENAI HGDAILAQRV ENLREAYEEA AAAEDLVIRE YARGVSTIFE
LLTAQSRRIS AESQYISARR ERATNRVDLY LALAGDFSAA QSADPAAQTG E
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