Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0454 |
Symbol | dapD |
ID | 4285639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 529620 |
End bp | 530447 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638139917 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_755685 |
Protein GI | 114569005 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.961288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CACATCTCAT CACCACCATC GATACTGCTT GGGACAATCG TGACAGCGTC TCGACCGACA CGACCGGGGA AGTCCGGGAT GCCGTGGAGA CCGCGATCAA CCTGCTCGAT AGTGGCAAGG CGCGGGTCGC GTCGCGCGGG GATGACGGCC ATTGGGTGGT GCATCAATGG CTGAAAAAGG CCGTACTGCT CGGCTTCCGC CTCAATCCGA TGGATTTGAT CGAGGGCGGG ATTGCCGGTG CGAAATGGTG GGACAAGGTG CCGTCCAAGT TTGAGGGTTG GGGCGAGGCC GAGTTCAAGG CTGCCGGTTT CCGCGCCGTG CCGCCCTGCG CCGTGCGCCG CGGTGCCTTC ATCGCGCCGG GCGCTGTGCT GATGCCATCC TATGTCAATC TGGGCGCCTA TGTCGGCGAA GGCACGATGA TCGACACCTG GGCCAGTGTC GGCTCGTGCG CCCAGGTCGG TGCCAATTGC CACATCTCGG CCGGGACCGG GATTGGCGGC GTTCTCGAAC CGCTGCAGGC CGATCCGGTG ATCATCGAGG ATAACTGCTT CATCGGCGCC CGCTCGGAAG TCGTCGAGGG CGTGATCGTG CGCGAGGGTT CGGTGCTGGC GATGGGGGTC TACATCACCC GCTCGACCAA GATCGTCGAC CGCGCCAGCG GCGAGATCAG CTATGGCGAA GTGCCGGCAT ACTCGGTCGT CGTGCCCGGC GCCCTGCCCG ACCCCAAGGG CGGACCGAGC CTTTATTGCG CCGTCATCGT CAAGCGCGTC GACGCCCAGA CCCGCGCCAA GACCTCGATT AACGACCTGC TGCGCTAG
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Protein sequence | MTDTHLITTI DTAWDNRDSV STDTTGEVRD AVETAINLLD SGKARVASRG DDGHWVVHQW LKKAVLLGFR LNPMDLIEGG IAGAKWWDKV PSKFEGWGEA EFKAAGFRAV PPCAVRRGAF IAPGAVLMPS YVNLGAYVGE GTMIDTWASV GSCAQVGANC HISAGTGIGG VLEPLQADPV IIEDNCFIGA RSEVVEGVIV REGSVLAMGV YITRSTKIVD RASGEISYGE VPAYSVVVPG ALPDPKGGPS LYCAVIVKRV DAQTRAKTSI NDLLR
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