Gene Mmar10_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0422 
Symbol 
ID4285556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp501225 
End bp502751 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content63% 
IMG OID638139885 
Producttype II secretion system protein E 
Protein accessionYP_755653 
Protein GI114568973 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCA AGCGTGCCGG AGGACCGACA CCCACGACCG CCCCGATGAC GCCGCCGCCG 
GCAGCGCCAA AGGCCGAGGC GCGTCCGGAT CCTGCGTCGC ACCGGGAGGC GCCGTCAGCC
CCCGCCGCCA TGCCCAGCGC GCCAAACGCC GCTACGCCTG CCCCGAAGCC GGTCGCCAAG
CCGGCACCGG GTGCCTATAC CGGGCCAAAA GCTGCCAAGC GTACCGTGCG GGCCGCCGAA
CCCGGTGGCC GGTCGGAAGA GTATTATGCG ATCAAGACGA CGATCTTCAA CGCCCTGATC
GACACCATCG ATCTGGGGCA GTTGGCGCGT CTGGACAATG AAACCGCGGC CGAGGAAATC
CGCGACATTG TCACCGAGAT CATCTCGATC AAGAACGTCG CCATGTCGAT CGCCGAGCAG
GAACAACTGC TCCAGGACAT CTGTAATGAT GTGCTCGGCT TTGGTCCGCT GGAGCCGCTC
CTGGCTCGCG ACGACATCGC CGACATCATG GTCAATGGCG CCGACAAGGT CTTCATCGAG
GTCAATGGCA AGCTCGAGGA GACGAATATC CGTTTCCGCG ACAATGCCCA GCTGATGAAT
ATCTGTCAGC GTATCGTCAG CCAGGTCGGA CGCCGGGTTG ATGAGAGTTC GCCGATCTGT
GACGCCCGCC TGATGGACGG CTCACGCGTC AACGTCATCG CGCCGCCGCT GGCGCTGGAC
GGCCCGACGC TGACCATCCG GAAGTTCAAG AAAGACAAGC TGCAGATGCA GAACCTGGTG
GAGTTCGGCT CCATCACGCC GGAAGGCGCC AAGGTTCTGT CCATCATCGG GGCTTCGCGC
TGTAACGTCC TGATTTCGGG CGGTACCGGC TCCGGCAAGA CCACGCTTTT GAACTGCATG
ACCGGCTTCA TCGAGGAAGA CGAGCGCGTC GTGACCTGTG AAGACGCCGC CGAATTGCAA
CTGCAACAGC CCCATGTCGT CCGCCTCGAG ACCCGTCCGC CGAACCTGGA AGGGTCCGGC
ATGGTCACCA TGCGGGATCT GGTCAAGAAC TGCCTGCGTA TGCGTCCTGA ACGGATCATC
GTCGGTGAGG TGCGTGGCCC GGAGGCGTTC GACCTCCTGC AGGCCATGAA TACCGGCCAT
GACGGCTCGA TGGGCACACT GCACGCCAAC TCGCCGCGCG AAGCCATGTC GCGGATCGAG
TCGATGATCA CGATGGGCGG TTATAACCTG CCCGCCAAGA CGATCCGTGA GATGATCGTC
GGCTCGATCG ACGTCATCGT GCAGGCGGCA CGCTTGCGCG ATGGTTCGCG GAAAATCACC
CACATAACCG AAGTGGTCGG CATGGAGGGC GAAGTCATCG TCACCCAGGA CCTCTTCCTC
TACGAGATCA AGGGCGAGGA CGAGCACGGC AAGATTGTCG GCCAGCACGC CTCGACCGGT
ATCGCGCGTC CGAAATTCTG GGATCGCGCC CGCTATTTCG GCCTGGAACG CGAGCTCGCC
AATGCGCTCG ATGCGTCGGA GGCCTGA
 
Protein sequence
MFGKRAGGPT PTTAPMTPPP AAPKAEARPD PASHREAPSA PAAMPSAPNA ATPAPKPVAK 
PAPGAYTGPK AAKRTVRAAE PGGRSEEYYA IKTTIFNALI DTIDLGQLAR LDNETAAEEI
RDIVTEIISI KNVAMSIAEQ EQLLQDICND VLGFGPLEPL LARDDIADIM VNGADKVFIE
VNGKLEETNI RFRDNAQLMN ICQRIVSQVG RRVDESSPIC DARLMDGSRV NVIAPPLALD
GPTLTIRKFK KDKLQMQNLV EFGSITPEGA KVLSIIGASR CNVLISGGTG SGKTTLLNCM
TGFIEEDERV VTCEDAAELQ LQQPHVVRLE TRPPNLEGSG MVTMRDLVKN CLRMRPERII
VGEVRGPEAF DLLQAMNTGH DGSMGTLHAN SPREAMSRIE SMITMGGYNL PAKTIREMIV
GSIDVIVQAA RLRDGSRKIT HITEVVGMEG EVIVTQDLFL YEIKGEDEHG KIVGQHASTG
IARPKFWDRA RYFGLERELA NALDASEA