Gene Mmar10_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0421 
Symbol 
ID4285555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp499736 
End bp501217 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content62% 
IMG OID638139884 
Productresponse regulator receiver protein 
Protein accessionYP_755652 
Protein GI114568972 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAG ACCCTTTCCT GGACGGTGAC GACCCGTTCC TGGACGCGGC TGATGTCGAG 
CGTCTGTTGC TGGGTGAAGC GACCCGCGAA GAGATGAACC GGGCGCCGGC CGCAGCGGCG
CCGGTCGATG ATTTCGGTGA TGACGACCCG TTCATGGCGG ATGCCGGACC GGCCCCGTCG
CCTCAACCAG CAGAACGGGT GATCGATCCG GTCTTCGAGG ACCTGCAGGA TGAAGTCCCC
GGTCTGTCGG CTGCTGAATC GCTGTATGGT GAAGTCGATA ATGACGTGCC GGACCAACCG
GTTCCGCGCA TTTCAGTCGG AGCCTTTTGT GAACGCCCGG AAACCGGCGC CCTGATCCAC
AATGCCGCCA ATGATCGCCG GCTCGCCAAG GCCCATGTCA CGGTCGAGCT GGGTGGTCTG
CCGGCGGCGA TCGAACGTTA CCACGACGAA ACCACGCCGA ATTTGCTGAT CATCGAGAGC
GGCATGCGGG GCAGGGGCCT GTTCGACCAG CTTGAGGAGC TGGCCGGGGT CTGTGATCCC
GACACCAAGG TTATCATCGT CGGTGCGGCC AATGATATCA GCCTGTATCG CGAGTTGATG
AAGCGCGGGG TCAGCGAGTA CCTGGTGCCG CCAATGACGC CGATGCACGT CATCCGCACC
ATCTCCGAAC TCTTTCTCGA CCCGGAACAG CCCTTTGCCG GCAAGACGAT CGCCTTCATC
GGCGCCAAGG GCGGTGTCGG CTCGTCAACC ATTGCCCATA ACTGCACCTG GGCGATGACC
GAGGGCATGC AGTCAGATGC AGTCCTGGTC GATCTGGACT TGTCTTTCGG CACTGCCGGG
CTCGATTTCA ACCAGGATCC TGCCCAGACG CTGGGCGATG CCCTGGCCGA GCCGGACCGG
CTTGATGATG CCCTGCTGGA CCGCCTTCTG GTTCGCTGCA CGGATCGTCT CAGCCTGTTT
TCAGCGCCCG CAACGCTGGA CCGCGAGTGG GATTTCGGTC CGCAGGACTA CGAGACCGTA
CTGGAAAAGG TACGGCGACA GGCCCCCTAT GTGGCGCTCG ATCTGCCGCA CATGTGGACG
CCCTGGGTCA AGCAGACGCT TCTTGCTGCC GATCAGGTGG TGGTCACCGT TTCACCGGAC
CTCGCCTCCC TGCGCAATGC CAAGAACCTG TTCGACCTGG TCGCCGGTGC CCGTCCCAAT
GACGAACCGC CGCGCGTCGT GATCAACATG GCCGGCATGC CCAAGCGTCC GGAAATTCCG
ATCAAGGATT TCGCAGAAGC GCTCGGGACG CCGCCGACCC TGGTCCTGCC GTTCGAGCCG
CAATTGTTCG GCAAGGCGGC CAATAACGGC CAGATGATCA CCGAACTCGA TCCCAAGTCC
AAAGCGGCCG AGGGATTCTC CCATCTCGCC AGCCTTGTCT CCGGCCGGAC ACCGGTGGCG
ATGCCCAAGC GTTCACTCAT CGCAAAACTT TTCGGAGGCT AG
 
Protein sequence
MKQDPFLDGD DPFLDAADVE RLLLGEATRE EMNRAPAAAA PVDDFGDDDP FMADAGPAPS 
PQPAERVIDP VFEDLQDEVP GLSAAESLYG EVDNDVPDQP VPRISVGAFC ERPETGALIH
NAANDRRLAK AHVTVELGGL PAAIERYHDE TTPNLLIIES GMRGRGLFDQ LEELAGVCDP
DTKVIIVGAA NDISLYRELM KRGVSEYLVP PMTPMHVIRT ISELFLDPEQ PFAGKTIAFI
GAKGGVGSST IAHNCTWAMT EGMQSDAVLV DLDLSFGTAG LDFNQDPAQT LGDALAEPDR
LDDALLDRLL VRCTDRLSLF SAPATLDREW DFGPQDYETV LEKVRRQAPY VALDLPHMWT
PWVKQTLLAA DQVVVTVSPD LASLRNAKNL FDLVAGARPN DEPPRVVINM AGMPKRPEIP
IKDFAEALGT PPTLVLPFEP QLFGKAANNG QMITELDPKS KAAEGFSHLA SLVSGRTPVA
MPKRSLIAKL FGG