Gene Mmar10_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0389 
Symbol 
ID4285541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp462946 
End bp464166 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content68% 
IMG OID638139852 
Productgeneral secretion pathway L 
Protein accessionYP_755620 
Protein GI114568940 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3297] Type II secretory pathway, component PulL 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.454509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG ACCTGATCCT GAAGCCGATG CGTGAGGGCG CGATCGCCTG GTCGGTCGTC 
GACCGGCGTG GCGCGACCCG CCTCCACGAA GGACGGCTGG CCAGCGGAGA AAGCTTTCCC
GTCGGTGTCG CCGATGCGGT CGATCGCACG CTCATCCTGC TGCCAGGTGA GCATCTCCAT
GTGACCCGGC TGGCCATTCC GGCAAAATCC GAGCACCAGG CCCGGCAGGC GGCGCCCTTC
CTGCTCGAGG ACGAGCTCGC CTCGCGCCTG TCCGGGACCA CCATACTGCC CGGCCCGCGC
GCCGATGATG GCAGCCGCTG GGTGGTGGCG GTTGAAACTG GCTTGCTGGA TGAGTGGCGC
GAGGCGCTGG CCCCGTTGAT CGTCCGTCCG GCCTTCATCG TTCCGGACAG CCTGGTGGCC
GCCGAACCCG GCGCCGCGCT GACGCTGTAT GACCGTGGTG ACGCAATCCT GTTTGCCCAT
GATCCCGATG CCGAGGAGCC GGCCCGGCCG CTCGCCGGCG TGATGGACAC GGCGCTGTTC
GGGTCGGTGG TGCAGGCCCT GGTCAAGGCG GCCGGAAGCG GCGAGATCGC CGTGTCGCGC
TCGCTGGGGC TGACCGGTGC CAATTTCCGC GCCATCGGGC AGGGCGGGAT CGACCTGCGC
GCCAGCGCTC TCGATGCCGA ACGGCTGGCG GCCCTGCCGC GCCTGTTCGG CGACAGTTTT
GCCTCGACCA TGGACTGGTC GTCTCTGGTG CGGCCGCTGC GCCGCCCGCT CCTGCTGGCG
GCCGGTCTAT TGCTGGCCTT CTGCCTGCTG ATCGGCGGCG AGACGATCTA TTACCGCCTG
CAGGCCGAGC GCTTTGAAAC AGCGACCCTG GCCGAGTTCG ATCATGCCAT GCCGGACTTT
GGCCGTGCGG TCATTCCGGC CGAGGCCGAG CGCCTGCTGC GGGCCCGTGT CGAGCGTCTG
TCCGGTGACG GTCAGTCGGC CTTCCTGCAG CTGATCACGG CGCTAGACGA GCTGGTCGAC
GGCAATGACA GCGTCCGCAT CGACCATGTC CGTTACGACC CGGCCCGCGC GGCCCTGTCG
GTCGGTGCGA CCTATTCGGA CTTCTCCGAT TTTGACGACC TCAATGCCCG CGCCGACCAG
CTGGGTCTGC GTCTGGACGA TGGCGGTGCC CGTGAGAGCA CGGCCGGGAT TGAGGGCGAG
TTTGTGATGA GGCTGCCATG A
 
Protein sequence
MSQDLILKPM REGAIAWSVV DRRGATRLHE GRLASGESFP VGVADAVDRT LILLPGEHLH 
VTRLAIPAKS EHQARQAAPF LLEDELASRL SGTTILPGPR ADDGSRWVVA VETGLLDEWR
EALAPLIVRP AFIVPDSLVA AEPGAALTLY DRGDAILFAH DPDAEEPARP LAGVMDTALF
GSVVQALVKA AGSGEIAVSR SLGLTGANFR AIGQGGIDLR ASALDAERLA ALPRLFGDSF
ASTMDWSSLV RPLRRPLLLA AGLLLAFCLL IGGETIYYRL QAERFETATL AEFDHAMPDF
GRAVIPAEAE RLLRARVERL SGDGQSAFLQ LITALDELVD GNDSVRIDHV RYDPARAALS
VGATYSDFSD FDDLNARADQ LGLRLDDGGA RESTAGIEGE FVMRLP