| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0387 |
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| Symbol | |
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| ID | 4285539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 461289 |
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| End bp | 461951 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638139850 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_755618 |
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| Protein GI | 114568938 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.618821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCCGG TCCAGCCATC CGCACAGGCC GGCTTCTCGC TCACCGAAGT CCTGGTCTCG
GTCTTCATCT TCGCCATCAT CGGCTCGATC TCGGTCGGGC TGATGGCGTC GAGCCTGTCG
GCGCAGGAAC AGAACTCCGA TGTGCTCGAC CAGGCCGCCA TGCTGGACAC CACCCGCACC
CTGTTGCGTG AGGATTTCGG GCAGGTGGTG CTGCGCCCGG CGCGCGATGC GGAAGGTCGT
ACCCTGACCG CCCTGTTCGC CGGAGATGTG GACGGGGTGG ACCGGAGCGG TTTCGGTGAC
GGCGTGCGTT CCGGCGACAC CATTCTCACC CTCACCCGCC GGGGTCGGTC CAATCCCGGC
TTGCTGCGTC CGCGGTCCAG CCTGGCCCGC GTCGATTATG TGCTGCGCGA CGGCAATCTC
GTGCGCCGGA TGATGCGCCA TGTCGATGGC AGCCAGCCGA TCGATGATGG CGAGATCGTG
CTGGTGGCCG GTGTCAGCGA TGTCGAACTC GATTTCCTGG TCGGCGCGGC GTGGACGCGG
CGGGTGATGC TCAGATCGGG CCAGGGCGAG GCCGGGCTGC CGCGCGCCGT GCGCCTGCGC
TACAACGCGC CGCGCCTGGG CGTCGTTGAA CATGTGGTCC TCACATCGGG GGCAGGCGGA
TGA
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| Protein sequence | MTPVQPSAQA GFSLTEVLVS VFIFAIIGSI SVGLMASSLS AQEQNSDVLD QAAMLDTTRT
LLREDFGQVV LRPARDAEGR TLTALFAGDV DGVDRSGFGD GVRSGDTILT LTRRGRSNPG
LLRPRSSLAR VDYVLRDGNL VRRMMRHVDG SQPIDDGEIV LVAGVSDVEL DFLVGAAWTR
RVMLRSGQGE AGLPRAVRLR YNAPRLGVVE HVVLTSGAGG
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