Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0339 |
Symbol | |
ID | 4285491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 400014 |
End bp | 401840 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638139802 |
Product | GTP-binding protein TypA |
Protein accession | YP_755570 |
Protein GI | 114568890 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0649933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGT CCCTCGACAA GCTGCGCAAT ATCGCCATCG TGGCGCACGT TGACCACGGC AAGACCACGC TGGTCGACCA GCTGCTGCAA CAGTCCGGTA CGCTGGGCGA GCGGGCCAAT GTGTCCGAGC GGATGATGGA TTCCAACGAT CTGGAAAAAG AGCGCGGGAT CACGATCCTG GCCAAGAATA CCGCCGTCAC CTGGAATGAC TGGAACATCA ACATCGTCGA CACCCCCGGC CACGCCGATT TCGGCGGTGA GGTCGAGCGC GTCCTGTCGA TGGTGGATGG TGTCCTCCTT CTGGTTGATG CGGTTGACGG CCCGATGCCG CAGACCTCGT TCGTGACCAA GAAAGCGCTG GCCCGCGGTC TCAAGCCGAT CGTCGTGATC AACAAGGCCG ACCGTCCTTC CGCCCGTCCT GACTGGGTTG TCGACCAGAC GTTTGACCTG TTCGACCGTC TCGGCGCCAA TGAGGAACAG CTCGACTTCC CGGTCGTCTA TGCCTCCGCC CTGCAGGGCT GGGCCGCCAA TGAGGCGGGC GTGATCGGCA CCGACATGAA GCCGTTGTTC GAGATGATCA CCGCCCACAC GCCGCGCCCC GACGTGGATC TGGACGGCCC GCTGCAACTG CAGGTCTCGG CGCTGGATTA CTCCTCCTTC ACCGGCGTGA TCGGCATTGG CCGCGTCGCC CGTGGCCGGG TCGCCCGCAA CCAGCCTGTC ACCGTGGCCA AGGCCGATGG CCGCCAGGTC CGGGGCAAGG TCCAGCAGAT CTTCGGTTTC CACGGTCTCG AGCGGATCGA GCTGGAAAGC GCCCAGGCTG GCGACATCAT CACCTTTACC GGCATCGACA ATCTGAAAAT CTCCGACACG CTGTGCGACC CCGACAATGT CGAGGCCCTG CCGCTCCTGT CCGTTGACGA GCCGACCCTG TCGATGACCT TCCAGGTCAA TGACAGCCCG TTCGCCGGTC GCGAAGGCAA GTTCGTGACC TCGCGCAATC TCAAGGAACG TCTTGAGCGC GAGCTGATCC ACAATGTGGC GCTGAAGGTC GAGCAGCAGG ACAATCCGGA CAAGTTCACC GTCTCCGGAC GCGGCGAGCT GCACCTGTCC ATCCTGATCG AGACCATGCG CCGCGAAGGC TTCGAACTGG CCGTCGGTCG TCCGCGCGTG GTCATCAAGG AGATCGATGG CGAGCAGTGC GAACCCTATG AGAGCCTGAC TGTCGACCTC GAGGAAGATC ACCAGGGCGG CGTCATGGAG AAGCTCGGCC AGCGCAAGGC CGAGATGAAG AACATGGTGC CGGACGGGCA TGGCCGGGTC CGCATCGACT ATGTCATCCC GACCCGTGGC CTGATCGGTT TCCGCTCGGA ATTCCTGACC CTGACCTCGG GCACCGGCCT GATGTTCCAC ACTTTCGATC ACTACGCCCC CAAGACCGGC GGCGAGATCG GCCAGCGTCA CCACGGCGCC ATGGTCTCGA TGATCGACGG CAAGGTGCTG GGCTTTGCCC TGTTCAACCT GCAGGAGCGC GGCAAGCTCT TCGTCGGCCA TGCCGTCGAG GTCTATGAAG GCATGATCAT CGGCGTGAAT TCGCGCGATG ACGACATGAT CGTCAATCCG ACCAAGGGCA AGAAGCTGAC AAACATGCGG GCCTCGGGCA CCGACGAGAA CATCGTCCTG ACCACCCCGA TCAAGCTGAC CCTGGAATAC GCTCTGGAAT TCATCAATGA CGACGAACTC GTCGAGGTGA CCCCCCAGAC CATCCGTATC CGCAAGACCT TCCTGAAAGA GCACGAACGC AAGAAGGCCT CGCGCTCCGC GGGTTAG
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Protein sequence | MSASLDKLRN IAIVAHVDHG KTTLVDQLLQ QSGTLGERAN VSERMMDSND LEKERGITIL AKNTAVTWND WNINIVDTPG HADFGGEVER VLSMVDGVLL LVDAVDGPMP QTSFVTKKAL ARGLKPIVVI NKADRPSARP DWVVDQTFDL FDRLGANEEQ LDFPVVYASA LQGWAANEAG VIGTDMKPLF EMITAHTPRP DVDLDGPLQL QVSALDYSSF TGVIGIGRVA RGRVARNQPV TVAKADGRQV RGKVQQIFGF HGLERIELES AQAGDIITFT GIDNLKISDT LCDPDNVEAL PLLSVDEPTL SMTFQVNDSP FAGREGKFVT SRNLKERLER ELIHNVALKV EQQDNPDKFT VSGRGELHLS ILIETMRREG FELAVGRPRV VIKEIDGEQC EPYESLTVDL EEDHQGGVME KLGQRKAEMK NMVPDGHGRV RIDYVIPTRG LIGFRSEFLT LTSGTGLMFH TFDHYAPKTG GEIGQRHHGA MVSMIDGKVL GFALFNLQER GKLFVGHAVE VYEGMIIGVN SRDDDMIVNP TKGKKLTNMR ASGTDENIVL TTPIKLTLEY ALEFINDDEL VEVTPQTIRI RKTFLKEHER KKASRSAG
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