Gene Mmar10_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0339 
Symbol 
ID4285491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp400014 
End bp401840 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content62% 
IMG OID638139802 
ProductGTP-binding protein TypA 
Protein accessionYP_755570 
Protein GI114568890 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0649933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGT CCCTCGACAA GCTGCGCAAT ATCGCCATCG TGGCGCACGT TGACCACGGC 
AAGACCACGC TGGTCGACCA GCTGCTGCAA CAGTCCGGTA CGCTGGGCGA GCGGGCCAAT
GTGTCCGAGC GGATGATGGA TTCCAACGAT CTGGAAAAAG AGCGCGGGAT CACGATCCTG
GCCAAGAATA CCGCCGTCAC CTGGAATGAC TGGAACATCA ACATCGTCGA CACCCCCGGC
CACGCCGATT TCGGCGGTGA GGTCGAGCGC GTCCTGTCGA TGGTGGATGG TGTCCTCCTT
CTGGTTGATG CGGTTGACGG CCCGATGCCG CAGACCTCGT TCGTGACCAA GAAAGCGCTG
GCCCGCGGTC TCAAGCCGAT CGTCGTGATC AACAAGGCCG ACCGTCCTTC CGCCCGTCCT
GACTGGGTTG TCGACCAGAC GTTTGACCTG TTCGACCGTC TCGGCGCCAA TGAGGAACAG
CTCGACTTCC CGGTCGTCTA TGCCTCCGCC CTGCAGGGCT GGGCCGCCAA TGAGGCGGGC
GTGATCGGCA CCGACATGAA GCCGTTGTTC GAGATGATCA CCGCCCACAC GCCGCGCCCC
GACGTGGATC TGGACGGCCC GCTGCAACTG CAGGTCTCGG CGCTGGATTA CTCCTCCTTC
ACCGGCGTGA TCGGCATTGG CCGCGTCGCC CGTGGCCGGG TCGCCCGCAA CCAGCCTGTC
ACCGTGGCCA AGGCCGATGG CCGCCAGGTC CGGGGCAAGG TCCAGCAGAT CTTCGGTTTC
CACGGTCTCG AGCGGATCGA GCTGGAAAGC GCCCAGGCTG GCGACATCAT CACCTTTACC
GGCATCGACA ATCTGAAAAT CTCCGACACG CTGTGCGACC CCGACAATGT CGAGGCCCTG
CCGCTCCTGT CCGTTGACGA GCCGACCCTG TCGATGACCT TCCAGGTCAA TGACAGCCCG
TTCGCCGGTC GCGAAGGCAA GTTCGTGACC TCGCGCAATC TCAAGGAACG TCTTGAGCGC
GAGCTGATCC ACAATGTGGC GCTGAAGGTC GAGCAGCAGG ACAATCCGGA CAAGTTCACC
GTCTCCGGAC GCGGCGAGCT GCACCTGTCC ATCCTGATCG AGACCATGCG CCGCGAAGGC
TTCGAACTGG CCGTCGGTCG TCCGCGCGTG GTCATCAAGG AGATCGATGG CGAGCAGTGC
GAACCCTATG AGAGCCTGAC TGTCGACCTC GAGGAAGATC ACCAGGGCGG CGTCATGGAG
AAGCTCGGCC AGCGCAAGGC CGAGATGAAG AACATGGTGC CGGACGGGCA TGGCCGGGTC
CGCATCGACT ATGTCATCCC GACCCGTGGC CTGATCGGTT TCCGCTCGGA ATTCCTGACC
CTGACCTCGG GCACCGGCCT GATGTTCCAC ACTTTCGATC ACTACGCCCC CAAGACCGGC
GGCGAGATCG GCCAGCGTCA CCACGGCGCC ATGGTCTCGA TGATCGACGG CAAGGTGCTG
GGCTTTGCCC TGTTCAACCT GCAGGAGCGC GGCAAGCTCT TCGTCGGCCA TGCCGTCGAG
GTCTATGAAG GCATGATCAT CGGCGTGAAT TCGCGCGATG ACGACATGAT CGTCAATCCG
ACCAAGGGCA AGAAGCTGAC AAACATGCGG GCCTCGGGCA CCGACGAGAA CATCGTCCTG
ACCACCCCGA TCAAGCTGAC CCTGGAATAC GCTCTGGAAT TCATCAATGA CGACGAACTC
GTCGAGGTGA CCCCCCAGAC CATCCGTATC CGCAAGACCT TCCTGAAAGA GCACGAACGC
AAGAAGGCCT CGCGCTCCGC GGGTTAG
 
Protein sequence
MSASLDKLRN IAIVAHVDHG KTTLVDQLLQ QSGTLGERAN VSERMMDSND LEKERGITIL 
AKNTAVTWND WNINIVDTPG HADFGGEVER VLSMVDGVLL LVDAVDGPMP QTSFVTKKAL
ARGLKPIVVI NKADRPSARP DWVVDQTFDL FDRLGANEEQ LDFPVVYASA LQGWAANEAG
VIGTDMKPLF EMITAHTPRP DVDLDGPLQL QVSALDYSSF TGVIGIGRVA RGRVARNQPV
TVAKADGRQV RGKVQQIFGF HGLERIELES AQAGDIITFT GIDNLKISDT LCDPDNVEAL
PLLSVDEPTL SMTFQVNDSP FAGREGKFVT SRNLKERLER ELIHNVALKV EQQDNPDKFT
VSGRGELHLS ILIETMRREG FELAVGRPRV VIKEIDGEQC EPYESLTVDL EEDHQGGVME
KLGQRKAEMK NMVPDGHGRV RIDYVIPTRG LIGFRSEFLT LTSGTGLMFH TFDHYAPKTG
GEIGQRHHGA MVSMIDGKVL GFALFNLQER GKLFVGHAVE VYEGMIIGVN SRDDDMIVNP
TKGKKLTNMR ASGTDENIVL TTPIKLTLEY ALEFINDDEL VEVTPQTIRI RKTFLKEHER
KKASRSAG