Gene Mmar10_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0308 
Symbol 
ID4284102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp369535 
End bp371178 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content64% 
IMG OID638139771 
ProductFAD dependent oxidoreductase 
Protein accessionYP_755539 
Protein GI114568859 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.733784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0218745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC TGACCCGACT CTCCGCTCAT ACCTCACACA GGCCCAATCC TGACCGCGAC 
ATCGTGATCA TTGGCGGCGG CCATAACGGC CTCGTTTGCG CCGCCTATCT CGCCAAGGCC
GGTCTGAAGG TGACGGTTCT GGAACGCCGC GACGTGGTCG GCGGCGCCGC CGTTACGGAA
GAATTCCACC CCGGTTTCCG TAACTCGGTC GCCAGTTACA CGGTCTCCCT GCTCAACCCG
AAAGTGATCG CCGATCTCGA CCTGCACGGG CATGGCCTGG AGATCGTAGA GCGGAAAATC
GGCAATTTCC TGCCGCTTGA GGATGGCTAT CTACTGGCCG GGGACGGGCT GACCGCTGAT
CAGGTGCGCA AGTTTTCCGC TACCGATGCC GAGCAACTGG CAGAATACAG TGATCGGCTC
GAAGTGGTCG CAGACACGCT GCGCGCACTG GTTCTCGAAA CGCCGCCCAA CCTGTCCGAC
GGTGGCTGGT TGGGCGCCAT CCCGGAACTT CTCAAGGCCG CAAATCTGGG CGGTCGTCTG
GGCAGCATGT CAATCACGGC CAGGCGTGAC CTCCTGGACC TGTTCTCCAA GTCGGCCGGC
GACTGGCTCG ACGGCTGGTT CGAGAGTGAC GCCATCAAGG CCCTGTTCGG CTTCGACAGC
ATTGTCGGCA ATTTCGCCAG CCCCTACACG CCCGGCAGTG CCTATGTCCT GCTGCACCAT
CTGTTCGGCG AGGTGAACGG CAAGAAAGGC GCCTGGGGTC ATGCGATCGG CGGCATGGGC
GCGATTACCC AGGCCATGGC CCGCTGCTGC GAAGCGCGAG GCGTCGAGAT CCGCACCGGT
TGCACCGTGG AAGAAGTTCT GGTCGTGGAT GGCGGCGCCG GCACGGTGGT ATTGGGCAGC
GGCGAGACGT TGAGCGCCCG TGCCGTGGTC TCCAACCTCA ACCCGAAACT CCTGTTCGGC
TCGCTGATTG ACCCTGCCGC ACTGCCTGCC GACTTCAATG AGCGCATCCG CCACTACAAA
TGCGGCTCCG GCACCTTCCG GATGAATCTC GCGCTCGACC GGCTGCCGGA TTTCACAGCC
CTGCCCGGCC CGGGCGATCA CCTGACCGCC GGCATCATCA TGGCGCCCTC CCTGGCCTAT
ATGGAACAGG CCTATGCCGA TGCCCGCCGG CAAGGCTGGT CGAACGAACC GATCATCGAG
ATGCTGATCC CGTCAACGCT CGACCCGACC CTGGCGCCGG ACGGGCAACA TGTGGCGAGC
CTGTTCTGTC AGCATGTCGC CCCGGAACTC TCCGGCGGCC GTGACTGGGA CGACCATCGC
GACGAGGTGG CAAAGGTGAT GATCAACGCG GTCGACAAAT GGGCCCCGGG CTTTGCCAAC
AGCGTGCTCG GCTATCAGGC TCTGACCCCG AAAGACCTCG AACGGACGTT CGGCCTGGTC
GGCGGGGATA TCTTCCATGG CGCGCTCAGC CTGGATCAGC TGTTCTCGGC CCGGCCCGTA
CTCGGCCATG CCGACCATCG CTGCCCGATC AAGAATCTCT ACCAATGCGG CGCTGGCACT
CACCCGGGCG GCGGTGTCAC AGGCGCCCCG GGGCACAATG CCGCGCGCGA GATCCTGAAG
GATTTCGGCA AGCGGATGGG GTAG
 
Protein sequence
MATLTRLSAH TSHRPNPDRD IVIIGGGHNG LVCAAYLAKA GLKVTVLERR DVVGGAAVTE 
EFHPGFRNSV ASYTVSLLNP KVIADLDLHG HGLEIVERKI GNFLPLEDGY LLAGDGLTAD
QVRKFSATDA EQLAEYSDRL EVVADTLRAL VLETPPNLSD GGWLGAIPEL LKAANLGGRL
GSMSITARRD LLDLFSKSAG DWLDGWFESD AIKALFGFDS IVGNFASPYT PGSAYVLLHH
LFGEVNGKKG AWGHAIGGMG AITQAMARCC EARGVEIRTG CTVEEVLVVD GGAGTVVLGS
GETLSARAVV SNLNPKLLFG SLIDPAALPA DFNERIRHYK CGSGTFRMNL ALDRLPDFTA
LPGPGDHLTA GIIMAPSLAY MEQAYADARR QGWSNEPIIE MLIPSTLDPT LAPDGQHVAS
LFCQHVAPEL SGGRDWDDHR DEVAKVMINA VDKWAPGFAN SVLGYQALTP KDLERTFGLV
GGDIFHGALS LDQLFSARPV LGHADHRCPI KNLYQCGAGT HPGGGVTGAP GHNAAREILK
DFGKRMG