| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0302 |
|---|
| Symbol | |
|---|
| ID | 4284044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 358377 |
|---|
| End bp | 362906 |
|---|
| Gene Length | 4530 bp |
|---|
| Protein Length | 1509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638139765 |
|---|
| Product | glutamate synthase (NADPH) large subunit |
|---|
| Protein accession | YP_755533 |
|---|
| Protein GI | 114568853 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.466931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA AGACCTGGTC CGAAGCCGCC CACCGCCAGG GGCTGGAAAC CCTCACCAAT
GCCGGCCTGA TCGATCCGCG TGACGAGCGC GATGCCTGTG GTGTCGGCCT GATCGCCGAC
ATGAAGGGGC GAGCCCGCCG CGATATTGTC GAGCTGGCGA TTGATGCGCT CAAGGCGGTC
TGGCACCGCG GCGCCGTCGA TGCTGACGGG CTGACCGGTG ACGGCGCAGG ATTGCGCGTC
GGTGTGCCGC AGGAATTCTT CAAGGCTGCC GTCGCCCGCA CCGGGCACGA ACCCGAGCGC
GGCGATGTCA TCGTCGGCAT GGTCTTCCTG CCGCGGACCG ATTTCGCCGC TCGCGAACGG
GCCCGGGCGA TCATCGAGGC GGAGATCCTG CGCGAGGGGT TTGCCTTTTA CGGTTGGCGC
CAGCCGCCGA TCGACACGTC TGTGCTGGGC GACAAGGCCC GCGCCACCCT GCCGGAAATC
GAGCAGGTCC TGTTCCGCGA TCCGCGCTGC CGTGACAGCG AGGCCGTCGA GCGTGTCCTC
TATATCGTGC GTCGCCGGAT CGAGCGCCGG GCTCGCGAGG AAAACCTGCG CGACCTCTAT
GTCTGCTCGC TGTCCTCGCG CGATATCATC TACAAGGGTC TGTTCCGGGC CGAGGATATC
GACGCATTCT ACCCCGATCT GCAATCGCCG GAATTCATTT CGCCCTTCGC AATTTTCCAC
CAGCGCTACT CGACCAATAC CTTCCCCGAA TGGCGGCTGG CCCAGCCCTT CCGCATGCTG
GCGCACAACG GCGAAATCAA CACGATCCGG GGCAATATCA ACTGGATGAA GAGCCATGAG
GTTCACATTG CCGAGACGGC CTTTGCCGAT GTCGAGCAGG ATGTGAAACC GGTCATCCAG
TCTGGCGCGT CCGACAGTGC GGCGCTTGAC CAGACCTTCG AAATCCTGGT CCGGGCCGGG
CGGTCGGCGC CGATGACCAA GACGCTTCTG ATCCCGGAAG CCTGGTCCAA GCGGGCCGAT
GTCATGCCCG AGGGCTGGAG CCGGATGTAT GAGTATTGCA ATGCGGTGAT GGAGCCGTGG
GACGGTCCGG CCGCGATTGC AGCTTTTGAT GGCCGCTGGG CGATTGCCGG GCTCGACCGC
AATGGCCTGC GCCCGATGCG CTATGCGCTG ACCAATGACG ATATTTTCGT GGCCGGCTCC
GAGACCGGCA TGGCGCCGGT CGATCCGGCC ACCGTCACCG AACGCGGCTC GATCACGCCG
GGTCGTCTGG TGGCACTCGA CATTGTCGAG GGCAAATTCT TCCGCGAGCA GGACATCCTC
AACGAGCTGT CCGAGCAGCA CCCCTATACG CGCTGGCTGG GTGAGATGGA GGATATCGAA
CCGATTGTCG GCCCCGGCGC CGAAGATCAG TTGTTCGATG ATGCCGATCG CACCCGCCGT
CAGGCCGCGT CCGGTTTTAC CTTCGAGAAT ATCGAGCTGG TCATCAAGGC GATGGCCGAG
GATGGCAAGG AGGCGGTCGG CTCGATGGGC GATGATGCGC CACTGGCCGT GCTGTCGGAA
AGCTACCGCC CGCTCTCCCA TTTCTTCCGC CAGAATTTCT CGCAGGTGAC CAACCCGCCG
ATCGACCCCC TGCGCGAAGG CCGGGTGATG GGTCTGAAGA CCCGTTTCCG CAATCTGGGC
AATATCCTCG GCCAGGGCGA GGCGCGGGCC AGCGTGCTGG TGCTGGAAAG CCCGATCCTG
TCGAATGGCA GTTATGAGCG CTGGCGTGAC CATATGGGCG GCGCGATCAA GGAGATCGAT
TGTCTCCTGC CGGTTGCGAG TGCCAATGGT GACGGGCAGG TCCTGCGGGC CGCGATCGAC
GAGGTGATCC GCGAATGCGT CGCCGCCGTT CGCGACGGTG CGGCTCATCT GGTGCTCACC
GATCACCGCC AGGACAGCGA GAATGCGGCG CTGCCAATGG TGCTGGTCGC CGGCGCAGTC
CACTCCACCC TGACACGCGA GGGCCTGCGC AATTTCTGTT CGCTCAATGT GCGGGCAGGT
GAGTGTTTCG ATGCCCACTA TGCTGCCGTC CTGATCGGTC TGGGCGCGAC CACCGTGAAC
CCCTATCTCG CCTTCGACAC GGTCACGGCC GGTCGTGAGG CTGTGGGCGG AGAAAGCTGG
GCCCGTGAAC GAGCTGCCCG TCTCAAGACG GCACTCGATG GCGGCCTGCT CAAAATACTC
TCAAAGATGG GGATTTCGAT CATTTCCTCC TATCGCGGGG GCTGCAATTT CGAAGTGCTT
GGCCTGTCGC GCGCCTTGGT CGAGGCCTAT CTGCCGGGCG TGGTGAGCCG GATTTCCGGT
ATCGGACTGC CGGGTCTGGA AGTGCGCACT ATCGACCTTC ATCGCCGATC CTGGCATGGC
GAAGCGCGGC TGCCGATCGG CGGCTTCTAT CGCCAACGCG CCAGCGGCGA TCGCCACGCT
CTCAATGCGC CGGTGATCAG CGCCCTGCAG ACGGCTGTCC GCGACAATGA TCCGGCGGCC
TGGAAACAAT ATGGCGCGGC AATCAAGGAT CAGGGTCCGA TCCAGTTGCG CGACCTGATG
GACATGCGCC CGATCGGTCC GACCGTGGGT CTGGACCGGG TCGAGTCGAT CAATGGCATC
CGCCGTCGCT TTGTCACGCC GGGCATGTCG CTGGGGGCGC TGTCACCCGA GGCGCATGGG
GCGCTCAATG TGGCCATGAA CCGGATCGGC GCCAAGTCGG TGTCCGGCGA GGGCGGCGAG
GATCCGGCCC GCTACAAGCC GCTGCCCAAT GGCGACAACA TGAATTCCGC GGTCAAGCAG
ATCGCATCCG GTCGTTTCGG CGTCACCGCC CAGTATCTGG GACAGTGCCG CGAGATGGAG
ATCAAGGTCG CCCAGGGCGC CAAGCCCGGC GAGGGCGGCC AGCTGCCCGG CTTCAAGGTC
ACCGAATTCA TCGCCCGCAT GCGACTGGCA ACGCCGGGCG TCAGCCTGAT CTCGCCGCCA
CCGCATCATG ACATCTATTC GATCGAGGAT CTGGCCCAGC TCATCTACGA CCTCAAGCAG
ATCAACCCGA CGGCCCGGGT TGGCGTCAAG CTGGTCGCGG CCGCGGGCGT CGGGGCTGTT
GCGGCCGGCG TCGCCAAGGC CAATGCCGAC ATTATCAATA TCTCCGGCTC GGTTGGCGGC
ACCGGAGCTG CCGCCCTGTC CTCGATCAAG TTCGCCGGCG GACCGCTGGA GCTCGGCCTT
GCCGAAGCGC ACCAGATGCT GTCGCTCAAC GGTCTGCGCG AACGCGTCAC CCTGCGCGCC
GATGGCGGTA TCCGCACCGG TCGTGACATC GTCATTGCTG CCATGCTGGG CGCCGAGGAA
TTCGGTGTTG GCACCGCTTC GCTGATCGCC CTGGGTTGTC TGATGGTGCG GCAGTGCCAT
TCCAACACCT GCCCGGTCGG GGTCTGCACC CAGGATGACG ACCTGCGCGC CCGCTTCGGT
GGCATTCCCG ACCATGTCGT CAATCTGATG ACCTTCCTGG CCCAGGACGT GCGTGAAATC
CTGGCCGACC TCGGTGCCAC CTCGCTGGAA GACATTATTG GCCGGGCCGA CCTGCTCGAC
CAGGTTTCGC GTGGTTCGCA GGCGCTGGAC GATCTCGACC TGTCGGCGAT CATGTCGCGG
GCCGATGCCG TGGAACGTCC GGCCCGCTCG ACCCGCAGCC TGCGCAATGA CGTCGCGCCG
GCGCTGGACG AACAAATCAT CCAGGACGCC GCCCCTGCCT TCGATCGCGG CGAGAAGATG
CAGCTCGATT ATGGCGTCAA GAATACCGAC CGCGCCGTCG GCACGCGGAC CTCGTCACAG
ATTGTCGAGC GGTTCGGCCC GGACGGGCTG GGGGTCGACC ACCTGACGCT GCGTCTGCGT
GGCTCGGCCG GCCAGTCGCT GGGCGCCTTC TCGGCCAAGG GTTTGCGGAT CGAGCTCGAC
GGTGATGCCA ATGACTATGT CGGCAAGGGC CTGTCCGGCG CCAGCATCAT CGTGCGGCCC
TATGGCGGCG CGACCGAGGC GAATGAGGAA CACGCCATCA TCGGCAATAC CTGCCTTTAC
GGCGCCACCT CCGGACGCCT GCTGGCGGCA GGACGGGCCG GCCAGCGTTT TGGTGTCCGC
AATTCGGGCG CCGACGCGGT GATCGAGGGC TGCGGGACAA ACGGGTGTGA GTACATGACC
GGCGGTACTG CCGTGATCCT CGGCCCGGTC GGTGATAATT TCGCGGCCGG CATGACCGGT
GGCGATGTCT TCATCTATGA CCCGGATCGC CGCCTTGATG CCCGACTCAA CCGCGAGACT
GTGCTGGCCT TCGATCTGGA AGGTGAGGGC GAACGTCGCT GCCTGTCGAT GATCGAGAGC
CATGCGGCCG AGACCGGCTC GCGCATCGCG GCCCGCTTGC TGGCCGCCTG GCCGGCAGAG
CGGCAACACT TCGTCCATCT GCGCGGTGAG GAAGTGGTGA AACGTGAGCG GGCGGCACTT
GCGGCAGCCA ATGACAGCCA GTCGGCCTGA
|
|---|
| Protein sequence | MTNKTWSEAA HRQGLETLTN AGLIDPRDER DACGVGLIAD MKGRARRDIV ELAIDALKAV
WHRGAVDADG LTGDGAGLRV GVPQEFFKAA VARTGHEPER GDVIVGMVFL PRTDFAARER
ARAIIEAEIL REGFAFYGWR QPPIDTSVLG DKARATLPEI EQVLFRDPRC RDSEAVERVL
YIVRRRIERR AREENLRDLY VCSLSSRDII YKGLFRAEDI DAFYPDLQSP EFISPFAIFH
QRYSTNTFPE WRLAQPFRML AHNGEINTIR GNINWMKSHE VHIAETAFAD VEQDVKPVIQ
SGASDSAALD QTFEILVRAG RSAPMTKTLL IPEAWSKRAD VMPEGWSRMY EYCNAVMEPW
DGPAAIAAFD GRWAIAGLDR NGLRPMRYAL TNDDIFVAGS ETGMAPVDPA TVTERGSITP
GRLVALDIVE GKFFREQDIL NELSEQHPYT RWLGEMEDIE PIVGPGAEDQ LFDDADRTRR
QAASGFTFEN IELVIKAMAE DGKEAVGSMG DDAPLAVLSE SYRPLSHFFR QNFSQVTNPP
IDPLREGRVM GLKTRFRNLG NILGQGEARA SVLVLESPIL SNGSYERWRD HMGGAIKEID
CLLPVASANG DGQVLRAAID EVIRECVAAV RDGAAHLVLT DHRQDSENAA LPMVLVAGAV
HSTLTREGLR NFCSLNVRAG ECFDAHYAAV LIGLGATTVN PYLAFDTVTA GREAVGGESW
ARERAARLKT ALDGGLLKIL SKMGISIISS YRGGCNFEVL GLSRALVEAY LPGVVSRISG
IGLPGLEVRT IDLHRRSWHG EARLPIGGFY RQRASGDRHA LNAPVISALQ TAVRDNDPAA
WKQYGAAIKD QGPIQLRDLM DMRPIGPTVG LDRVESINGI RRRFVTPGMS LGALSPEAHG
ALNVAMNRIG AKSVSGEGGE DPARYKPLPN GDNMNSAVKQ IASGRFGVTA QYLGQCREME
IKVAQGAKPG EGGQLPGFKV TEFIARMRLA TPGVSLISPP PHHDIYSIED LAQLIYDLKQ
INPTARVGVK LVAAAGVGAV AAGVAKANAD IINISGSVGG TGAAALSSIK FAGGPLELGL
AEAHQMLSLN GLRERVTLRA DGGIRTGRDI VIAAMLGAEE FGVGTASLIA LGCLMVRQCH
SNTCPVGVCT QDDDLRARFG GIPDHVVNLM TFLAQDVREI LADLGATSLE DIIGRADLLD
QVSRGSQALD DLDLSAIMSR ADAVERPARS TRSLRNDVAP ALDEQIIQDA APAFDRGEKM
QLDYGVKNTD RAVGTRTSSQ IVERFGPDGL GVDHLTLRLR GSAGQSLGAF SAKGLRIELD
GDANDYVGKG LSGASIIVRP YGGATEANEE HAIIGNTCLY GATSGRLLAA GRAGQRFGVR
NSGADAVIEG CGTNGCEYMT GGTAVILGPV GDNFAAGMTG GDVFIYDPDR RLDARLNRET
VLAFDLEGEG ERRCLSMIES HAAETGSRIA ARLLAAWPAE RQHFVHLRGE EVVKRERAAL
AAANDSQSA
|
|---|
| |