| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0253 |
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| Symbol | |
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| ID | 4284117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 288889 |
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| End bp | 291924 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638139716 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_755484 |
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| Protein GI | 114568804 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0016718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAT TACGAGGGGA GCGTCGTCTG TCGCGCTCCA GGTTGACCCG TGCTCTGATG
TTGAGCTGTG CGGTCACAGC ATTTTCGGCG CCGGCTTTCG CGCAGAATGA TGAAGTCGAA
GACGTCGTCG TCATCCAGGG GATTCGGCAG ACCATCCAGG ACTCGATCGA GACCAAGCGC
AATTCCGACA CGGTCGTTGA AGCACTGTCT TCCGACGACA TCGGCGACCT GCCGGCCCTG
TCGATTGGTG AGGCGCTGGA AACCTTGACC AGTGCGGCCT CCCATATCGA ACAGGGTGGC
GCGACCGAGA TTTCCATCCG AGGCCTCGGC CCTTATCTTG GCTCGACTGT CATTAATGGC
CGGGAAGCGG CCAATGGCAG TGGCGACCGT TCAGTCAATT TCAGCCAGTT TCCATCGGAA
TTGTTCAACT CCCTTGCCGT TTACAAGACG CAGGAAGCGA GCTTCATCGA AGGTGGCGTG
TCGGGTCAGA TTTCGCTCTC GACCCTTCGT CCCATTGATT ACGGCCGTAG CCGGATCCAG
CTGGAGCTGA AGGGGAATTA CAATCCGGAC AATTCGGATC TGAACATCAG TGAGCGGGGC
ATCGGTCACC GGGCGACGCT CAGCTTCGTC GACAGTTGGG AGACCGGCGC TGGCGAGTTC
GGCCTGTCCT TCGGTTATCA GAACAACCGC TCGACCAATC CCGAACAGGA AGCGCGCACG
ACCAGTTCAT TCCGTGATTG CCGCAATGTT GTCTCCGGAG ATCCCAACAG CGATAATTTC
GGCGTAGACA GCCTCGGTGA CCCGGATCAG AACTGCGATA GCGGCGGTGG CGATCTTGTG
CTTGAGGTCG ATCCCGCAAC CGGTGTTGCG CCGGACGCGA ACACCCCCTT CGTCTTTGTT
CCGAGCCAGC GCCATTTCCG CCAGAACATT ACGGATGATG CGCGTGACTC GATTTTCTTT
GCGGCCCAGT GGCAGCCGAA CGCGCGCTGG GACATCAATG TCGATTACCA GCAGTCCGAT
CGCGAATTCA CTGAACTGCG CAGTGACCTG ACGATCGACG GCAACTCGGT CCTGAACGTC
GGTGAAAGCG GCGAAATCGT CCCGTTGTCC GTGAGCCCGA CCGGCGCTTT TCTGGGTGGC
ACGACCTATG ACGGCGCAGA AGTCAGCTCG CACTATATGG AGCGCATCGA GGAATACACC
GGCTATGGAT TGCAAGCCGA ATACCAGCTG ACCGACGATC TGACGATTTC GGCCGACTAT
TCGTATTCGG AAACGATGCG GCGCGAGAAC ATCATCCAGT CACGCTTGCG CAGTGACACG
GACGGTGACT CCGGTTCAGA GGATGTTTTC GTCGGAATTA TCGTCGAGGA CGATGCGCAA
CGGTTTGTCT TCGGGGACTT TGATGTCACC GATCCGGCAA ACTTTGACGT CGGCCCCCGT
ACCCGGGAAG ACCTCAACCA GTTCCGCAAC AACAGCATCG AAGCCTTCCG GGCCGACTTC
GACTATCTGT GGGACAACGG GTTCATCACC AATGTTCGCG GTGGTGTCCG GCATTCAACG
CTGGAATATG ATTCCGTGCC TCGCGTGCGC CGCGAGAGCG ATGGCAGCCC GCTCTCTGTG
GGTGATGGTG CGGCGGCAAG CGCGGCCTGC ATGAACACTG TCTTCCCGGA AGATGACTTC
CTTGCGGACG TCGTGGATGG CCCGCTGATC ACGAATGTCG ACAGTGCCGG GAATGTCATC
GCCAACGGCA CCGGTAACTC CTATGTGACT TTCGACCCGC TGTGCCTTGC CGAGGCCATC
CTGGGTCGTG CACCGAGTAT CCCGGATGCG AGCGATGTCT TTTTGACCTC GGCTGAAATG
GGTACCGGTC AAAACCCGCT CCAGATTGTC GATGTTGCGG AAGAAACGAT CGCTGCCTAT
CTGCAGGCCG ACTTTACCGG AGAAATGGGT GAGCTGCCCG TGCGCGGTAA TTTTGGTGTT
CGTGTGGTGG ATACGGAAGT CACGTCGAAC GGGTATCGCG GTTCGCTGAC GATTGACCGC
GACGGGGCCA ATGTCATCAC CGGCATCGGC GTCGACAACA GCAATCTCGT CGAGATCACG
GCCAATCACA GCTATACCGA GGTTCTGCCG AGCGCGAACC TGGTTGTGGA GCTGCGCGAT
GACGTGCTGT TGCGCGGTGG CATCTACCGT GCGCTGTCGC GTCCGGACCC GTCCGATCTG
GGTGTGGGGC GCAGCTTCTC GAGCAGCATC GACAATGACG GCGGGTCGAC CGACGTGGCC
GATGTCATCG CCCAGGTCAC CGGCTTCGGA AACCCGGAGC TCGACCCTCT GATGTCGTGG
AATTATGACG CGGCGCTCGA ATGGTATCCC AATGAGGACA CCATTCTGGC CTTCGGGGTC
TACTACAAGA GCTTCAATGG TGGTTTCACA AACGTCGGGC AGGTGGAGAC TTTCACCGTC
GACGGCCAGG ACCTCCAGGC TGTTGTCACG ACCCAGTCGG TAGACAGCGA GGAGAGCACG
ATTTCAGGCT TTGAAATCTC GGCAGCGCAC GCCTTCAGCT ACCTGCCGGG TGCCTGGAGC
GGTCTCGGCT TCCGGGTCGG ATACAACTAC GCCGACTCTG ATTTCGAGTT CGAAGATGCC
GTCTTTGGTG CGTCGACGAT CATCGCCGCC GATGGCACCG AGATCGAACG GGTCGGAATC
GTGGCGCCAG CCAATGTCCC CGGCCTGTCG GAGCATGTCG CATCGGCGCA GCTGTACTAC
AGCATCGGGG ATCTCGATCT GCAGGGTGTC TACAAATATC GTAGTGGCTA CTTCCAGCAG
TTCATCTCGA CGCCGGGCAA TCTGCGCTAC ATCGACGAAC GCGGCATCTA CGAAGCCCGC
GCCTCGTATC AGGTCAATGA TGCGGTGCGT GTCAGCGTTG AGGCGATCAA TATCTTTGAC
GAGCCGCGGG TCCAGTACAA TCCGACCCTC GACAACTTCG CTGAAGTCAA TGTCTACGGA
CCCCGTATCT ACTTCGGAGT GCGGGGGCGG TTCTAA
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| Protein sequence | MFELRGERRL SRSRLTRALM LSCAVTAFSA PAFAQNDEVE DVVVIQGIRQ TIQDSIETKR
NSDTVVEALS SDDIGDLPAL SIGEALETLT SAASHIEQGG ATEISIRGLG PYLGSTVING
REAANGSGDR SVNFSQFPSE LFNSLAVYKT QEASFIEGGV SGQISLSTLR PIDYGRSRIQ
LELKGNYNPD NSDLNISERG IGHRATLSFV DSWETGAGEF GLSFGYQNNR STNPEQEART
TSSFRDCRNV VSGDPNSDNF GVDSLGDPDQ NCDSGGGDLV LEVDPATGVA PDANTPFVFV
PSQRHFRQNI TDDARDSIFF AAQWQPNARW DINVDYQQSD REFTELRSDL TIDGNSVLNV
GESGEIVPLS VSPTGAFLGG TTYDGAEVSS HYMERIEEYT GYGLQAEYQL TDDLTISADY
SYSETMRREN IIQSRLRSDT DGDSGSEDVF VGIIVEDDAQ RFVFGDFDVT DPANFDVGPR
TREDLNQFRN NSIEAFRADF DYLWDNGFIT NVRGGVRHST LEYDSVPRVR RESDGSPLSV
GDGAAASAAC MNTVFPEDDF LADVVDGPLI TNVDSAGNVI ANGTGNSYVT FDPLCLAEAI
LGRAPSIPDA SDVFLTSAEM GTGQNPLQIV DVAEETIAAY LQADFTGEMG ELPVRGNFGV
RVVDTEVTSN GYRGSLTIDR DGANVITGIG VDNSNLVEIT ANHSYTEVLP SANLVVELRD
DVLLRGGIYR ALSRPDPSDL GVGRSFSSSI DNDGGSTDVA DVIAQVTGFG NPELDPLMSW
NYDAALEWYP NEDTILAFGV YYKSFNGGFT NVGQVETFTV DGQDLQAVVT TQSVDSEEST
ISGFEISAAH AFSYLPGAWS GLGFRVGYNY ADSDFEFEDA VFGASTIIAA DGTEIERVGI
VAPANVPGLS EHVASAQLYY SIGDLDLQGV YKYRSGYFQQ FISTPGNLRY IDERGIYEAR
ASYQVNDAVR VSVEAINIFD EPRVQYNPTL DNFAEVNVYG PRIYFGVRGR F
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