Gene Mmar10_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0113 
Symbol 
ID4283821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp115560 
End bp116525 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID638139578 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_755347 
Protein GI114568667 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00247828 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.481083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAG ACGAGATCAT CACCGTGTTT GGCGGGTCCG GATTTGTCGG ACGTCATGTT 
GTCCGGGCGC TGGCAAAAGC GGGTTATCGC GTCCGCGTCG CCACGCGTCG CCCGCACCTG
GCCCAGGACC TGCGGGTCAT GGGCGTGGTC GGGCAGGTTC AACTGGTTCA GGCCAATCTG
CGCGTTGCGG CTTCGGTCGA GCGGGCCCTT GATGGGGCCA GCGGCGTGGT CAATCTGGTC
GGTGTCCTCA ACGAGAGTGG CCGCCAGACC TTTTCGCGCC TGCATGCCGT CGGAACAGCG
ACCATTGCCC AGGCTGCCGC AGGCATGGGC ATTGAGCGCA TGGTCCAGAT TTCCGCCATT
GGCGCCTCGG CAGACAGCGC CTCGCGCTAT GCCCGGACCA AGGCCGAGGG CGAAGCCGCC
GTGCTGGCTG CCATGCCCGA TGCGACCATC CTGCGCCCGT CCATCGTGTT CGGCACCGAG
GACAGCTTCT TCAACCGCTT CGCGGCGATG GCGCGCTTTG TGCCGGCCCT GCCGCTCTTT
GGCGGCGGCA AGACCCGTTT CCAGCCTGTT TTCGCAGGCG ATGTCGGCAA GGCGGTCCTG
GCCGCCTTCG AGCGCTCTGA CACGCGCGGC CAGACCTATG AGCTGGGCGG GCCGGGCGTC
TATACATTCG AAGAGCTGAT GCGCTTCATC CTCGACGAGA TCGACCGGCC GCGCTTCTTG
CTTCCCCTGC CCTGGGCGAT CGGCAAGGTG ATCGCGACCG TGTCCGAGCT GGTCGGTGCC
CTGCCGCTGA TGCCGGTCCT GATCACTCGC GACCAGCTGG TCCAGCTGCA GTCCGACAAT
GTCGTCGCTG ATGATGCCAA GGGACTGGCG GATCTGGGTA TTGCCGGTGA GACGGTCGAG
GCCATCGTGC CGGGCTATCT GGAACGCTAT CGCCGCTATG GCCAATTCCA CGAGCGTCAG
GCCTGA
 
Protein sequence
MLRDEIITVF GGSGFVGRHV VRALAKAGYR VRVATRRPHL AQDLRVMGVV GQVQLVQANL 
RVAASVERAL DGASGVVNLV GVLNESGRQT FSRLHAVGTA TIAQAAAGMG IERMVQISAI
GASADSASRY ARTKAEGEAA VLAAMPDATI LRPSIVFGTE DSFFNRFAAM ARFVPALPLF
GGGKTRFQPV FAGDVGKAVL AAFERSDTRG QTYELGGPGV YTFEELMRFI LDEIDRPRFL
LPLPWAIGKV IATVSELVGA LPLMPVLITR DQLVQLQSDN VVADDAKGLA DLGIAGETVE
AIVPGYLERY RRYGQFHERQ A