Gene Mmar10_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0109 
Symbol 
ID4283817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp110989 
End bp111603 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content61% 
IMG OID638139573 
Product3'-5' exonuclease 
Protein accessionYP_755343 
Protein GI114568663 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.378562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.35649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC ACTATCACAA GGGCGACCTG CCCGCAGACA TCGACCTCGG CCCTATTGTC 
GCGGTCGATA CGGAAACTCT CGGCCTGTCC CTCACGCGCG ACATGCTGTG CGTGGTCCAG
CTTTCGGCCG GTGATGGCGA TGCCCATGTC GTACAGATGA ACCGGGCCGA TTATGACTGC
CCCAATCTCA AGCGGGTCCT GGCGGACCCG GCGGTCGAGA AAATCCTGCA TTTTGCCCGC
TTCGACGTGG CCATGGTCGA TAAATATCTC GGCGTGACCA TGGCGCCGGT CTTCTGCACC
AAGATCGCCT CCAAACTGGT ACGCACCTAT ACCGACCGGC ACGGCCTCAA GGATGTGACC
CGCGAACTGG TCGGGGCCGA AATGAACAAG CAGCAGCAAT CCTCCGACTG GGGCGCCGAC
GAATTGTCGC CGGCGCAGCT GGATTATGCC GCGTCGGACG TCCTGCACCT GCACAAATTG
CGCGAAAAGC TGGGCATGAT GCTCGAACGC GAGGGGCGCA CGGATCTCGC CAAGGCCTGT
TTCGACTTCC TGCCAACCCG CGCGAAGCTG GACCTCGCCG GCTGGCCGGA AATCGACATT
TTTGCCCATT CCTGA
 
Protein sequence
MTVHYHKGDL PADIDLGPIV AVDTETLGLS LTRDMLCVVQ LSAGDGDAHV VQMNRADYDC 
PNLKRVLADP AVEKILHFAR FDVAMVDKYL GVTMAPVFCT KIASKLVRTY TDRHGLKDVT
RELVGAEMNK QQQSSDWGAD ELSPAQLDYA ASDVLHLHKL REKLGMMLER EGRTDLAKAC
FDFLPTRAKL DLAGWPEIDI FAHS