| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0086 |
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| Symbol | |
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| ID | 4283952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 87416 |
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| End bp | 90967 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638139549 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit A |
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| Protein accession | YP_755320 |
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| Protein GI | 114568640 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG CCCGTTTCGA TCCGGATATC CTCAAATCGG CCAGCGCTGA CCAGCAGCGT
GCCGCCCGTC CCGAGGCCAG TGTCTTCGTC GAGGCCAATG CCGGTTCCGG CAAGACGCGG
GTGTTGGTCG ACCGGGTGAT CAACCTGCTG CTGGCTGGCC ACAAGCCGGA AACCATCCTG
TGCGTGACCT ATACCAAGGC CGCCGCCGCC GAGATGAAGG AGCGCCTGTT CAAACGTCTC
GGTGACTGGT CAGTGACGCC GGACGAGGTC CTGGCTGTCG AGCTCAAGGC GCTGCTCGAT
CGTGATCTGA AGCCGGGTGA CGCCAACCGG GCCAGAAAAC TGTTCGCCCA GGCGCTGGAA
ACGCCGGGTG GCCTCAAGAT CCAGACCATT CACGCCTTTT GCGAAGGATT GCTGCGCCGC
TTTCCGCTCG AGGCCGGTGC CCCGCCCGGC TTTGACACGC TGGATGACAT ATCGGCCGGA
AAGGCGATGG ATGCGGCGCG CCGGGCTGTC CTGTCCGGTC TGGCACCGGA GGCCGTCAAC
ACGCTGATCG AGACCGGCGG CCCCGATGCG ATCAACACCA TCCTGCGCTG GGCCCGGTCC
AACCGTCATG ACTTCGCCGA GACCTGTGAG CGGGCCGGGG GATGCGACGG GTTGATCGCG
CAGTTGTGGG CGGTGCTGGA GCTGCCTGAG GGCAGCCATG CCGCAGCGCT CAAACAGGAT
GCCATGGCCG CCATGCCGCG CACCGAGGTG GAGGCCGCTT CGCACGCTCT GATCCATGAA
GGGGCGAAAA CCGATGTCAC GCGCGGTGAG ACCATCCGTG TAGCGTTGGC AGCGGGCGAC
CCGGCCCAAG CCTTCGATGC CTATCTGGCG GCGTTCTACA CCAAGGGCGG CACGGGGACG
CGGGCGGCCA GTCTGGCCAC CAAGACAATC TCCGACAGGT TTCCGCATGT CCTGTCCCTG
CTGGAGGCCG AGGCCGACCG GCTGGATGCG CTGAGGGACA TGATCAAGCG GGCCGATATT
GCGCGGGCGA GCGCCGTGGC GCTGCGCATT GTCGACGATT TTACGCGCGC CTATTCCGAA
GCTCTGGAAC AGGCTCGCGC GCTGGATTTT GACGATTTGA TCCGGCTGGC CGGTCTGTTG
TTGGCGCCGG AAAACCCCTT CTCCGGCTGG GTCGGCTACA AGCTTGATGG CCAGCTTGCC
CATGCCCTGA TCGATGAGGC CCAGGACACC GCGCCGCGCC AGTGGGACAT GATCCGCGGG
CTGACGGCCG AGTTTTTCGC CGGAGCCGGC GCGCAGGAGA CGGGCCGGAC CCTGTTCGTG
GTTGGCGACG AGAAACAGTC GATCTATTCC TTCCAGGGTG CCGAACCGGC CCGCTTCATC
GAAGAGGGCG ACCGGATTGC GGCCTCCGCG GCAGCGGTGG AATTGCCGTT TGAACGCCCG
GGACTGGATG TCTCCTTCCG CTCGGCGCCG GAGATTCTCA CCGCGGTCGA CCAGGCCTTC
GAGGCCAAGC GGCCGGCGCT GGAAATGAAG TTTGTCGCCG GTGCCACTGA TCTGCCCTTC
GCGCGCTATC AGGGCCACCG GGCTGCGCGG TCGCACACGC CGGGCTGTGT CGAGATTTGG
CCCGCCATCC CCAAGCCGGA GAAGACCGAA GAAGGCTCGA TCTTCGACCC GGTCGATCTG
CGGGCACGGG GCAGTTCGCG CGATGTGCTG GCCCAGACCG TGGCCGGTGA GATCGCCGAC
ATGATCAGCC GCGGCGATGC GGTCTGGGAG GAAAAGGGCG GACAGTTTAC CCAGCGCCCG
GTGAGACCCT CGGATATCGC CATCCTGGTC TGGCGCCGGA CGGGTGGCTT CTTTGAAGAG
GTGATCCGTC AGCTCAAGCT GGCCGGCGTT CCGGTCGCCG GGGCGGACCG GATGGTGCTG
CGCGACCAGA CCGCGGTGAA GGACATGCTG GCGCTGGGGC GCTTTGCCAT GACCTCCGGT
GATGATCTGG CGCTGGCCGA GGTCCTGCGC TCGCCGCTGT TCGACCCGGT CGACCCGGCA
AAGGCGGGGA TAGACGAGCA GGCGCTCTAT GACCTCGCCC GCTCACGCAC CGACCTGAAA
CGCCGCGGCA CGTTGTGGAA TGCGCTCTTC ACCAGCGAAG ATCCGCGCTT CGCCGACGCC
CGCTCTGCCC TGTCGGCCTT GCGTGACCAG GCCGACAAGT CGCGCCTGTA TGACTTCTTC
ACCGGCTTTC TCAATGCCCG GACGCCGACC GGTGAGACGC GCTGGGCGCG CATGTTTGCG
CGTCTGGGCG AGGAGGCGCG CGATCCGCTG CAGGAATTCC TGGCGCGGGC GCTGCAGCAC
GAGCGTGAAG AGGGCGGCGC CCTGGCCAGC TTCATCGCCC GCATCGAGGG CGAAGACGTC
CAGATCAAGC GCGAAATGAG CCCGGACCGC GACGAGGTCC AGGTGATGAC GGTGCACGCC
TCCAAGGGGT TGGAGCGCCC GGTCATCATC CTGCCGGACA CCACGCGCAG TCCGCTGACC
GGCAAGACCA CGCCAATCTT CGCGCAGACG GATTGCGGCC TGTTGTGGTC GCAGCGCAAG
GATGACGATA CCGACGCAGT TGCAGCGCTC CGCCAGCAAT CCGAGAACCG GCAATTGGCC
GAACATGGCC GCCTGCTCTA CGTCGCACTG ACCCGGGCAC GAGACCGGTT GATCGTCTGT
GGTTGGCGTC AGGGGCAGGG CCATCCGGGC CGGATCGCCG ACGACAGCTG GTACACTCAG
CTGGCAGAAG CCTGGCAGGG TGAGGAGTGG ATGCCCTTCG AGACCCCTGT CTCCCGCCTC
GTTGAGGACG CGGAGCCTGG CCTGCGCTTC GGTCCGGCGC CAGTGGCACT CGGTGCGGTC
AGCGAGGCGG GCGCCGGAGA CACGAGCCTC CCCGCCTGGG CCCGCTTGGC GGCGCCGGCC
GAGGGCGGAC AGATTTTGGG CGCTGCGCCG TCCAGCCTGT TGGCCGATGC TGACAGCGAA
CCGGCCGTCC TGTCGCCGCT GGCTGACCCG GGCGGGCATC GTTTCCGCCG CGGCGATGTG
ATCCACAAGC TGCTGCAGAC CCTGCCCGAC CTGCCATCGG ATCGCCGCGA AGCTGCCGGT
CAGCGTTTTC TGGCCGCGCA GTCTGATATC GCCGAGTCGG ATAGGGCACA GATCCTGACC
GAGACTCTGG GCATTCTGGA TCATCCCGAC TTCGCGCCGC TCTTCGGTCC GGGCAGCCGG
GCCGAAGTGG CCCTGGTCGG TCAGGCGCCC GGCCTGCCCG CCAATATGAT CATCCGCGGT
CAGGTCGACC GGCTGGTCGT GACCGGCGAT GAAGTGCTGA TCATCGACTA CAAGACCAAC
CGGCCGCCAC CGGCTGATGT TGCTGCAGTG GCGAAAGTTT ATCTCGGCCA GATGGCGACT
TACCGGGCTC TCCTTCGGGC AGTTCACCCC GGTAAATCCG TGCGTTGCGC CCTGCTGTGG
ACCGATGCGG CGCGATTGAT GGAGCTTCCC GACGCGGTTC TCGACACCAT CTTCGACACG
GGCGCGGCTT GA
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| Protein sequence | MSEARFDPDI LKSASADQQR AARPEASVFV EANAGSGKTR VLVDRVINLL LAGHKPETIL
CVTYTKAAAA EMKERLFKRL GDWSVTPDEV LAVELKALLD RDLKPGDANR ARKLFAQALE
TPGGLKIQTI HAFCEGLLRR FPLEAGAPPG FDTLDDISAG KAMDAARRAV LSGLAPEAVN
TLIETGGPDA INTILRWARS NRHDFAETCE RAGGCDGLIA QLWAVLELPE GSHAAALKQD
AMAAMPRTEV EAASHALIHE GAKTDVTRGE TIRVALAAGD PAQAFDAYLA AFYTKGGTGT
RAASLATKTI SDRFPHVLSL LEAEADRLDA LRDMIKRADI ARASAVALRI VDDFTRAYSE
ALEQARALDF DDLIRLAGLL LAPENPFSGW VGYKLDGQLA HALIDEAQDT APRQWDMIRG
LTAEFFAGAG AQETGRTLFV VGDEKQSIYS FQGAEPARFI EEGDRIAASA AAVELPFERP
GLDVSFRSAP EILTAVDQAF EAKRPALEMK FVAGATDLPF ARYQGHRAAR SHTPGCVEIW
PAIPKPEKTE EGSIFDPVDL RARGSSRDVL AQTVAGEIAD MISRGDAVWE EKGGQFTQRP
VRPSDIAILV WRRTGGFFEE VIRQLKLAGV PVAGADRMVL RDQTAVKDML ALGRFAMTSG
DDLALAEVLR SPLFDPVDPA KAGIDEQALY DLARSRTDLK RRGTLWNALF TSEDPRFADA
RSALSALRDQ ADKSRLYDFF TGFLNARTPT GETRWARMFA RLGEEARDPL QEFLARALQH
EREEGGALAS FIARIEGEDV QIKREMSPDR DEVQVMTVHA SKGLERPVII LPDTTRSPLT
GKTTPIFAQT DCGLLWSQRK DDDTDAVAAL RQQSENRQLA EHGRLLYVAL TRARDRLIVC
GWRQGQGHPG RIADDSWYTQ LAEAWQGEEW MPFETPVSRL VEDAEPGLRF GPAPVALGAV
SEAGAGDTSL PAWARLAAPA EGGQILGAAP SSLLADADSE PAVLSPLADP GGHRFRRGDV
IHKLLQTLPD LPSDRREAAG QRFLAAQSDI AESDRAQILT ETLGILDHPD FAPLFGPGSR
AEVALVGQAP GLPANMIIRG QVDRLVVTGD EVLIIDYKTN RPPPADVAAV AKVYLGQMAT
YRALLRAVHP GKSVRCALLW TDAARLMELP DAVLDTIFDT GAA
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