Gene Mmar10_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0055 
Symbol 
ID4284063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp56218 
End bp56817 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID638139517 
ProductXRE family transcriptional regulator 
Protein accessionYP_755289 
Protein GI114568609 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.672462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATTGGG GCAAGGCCTT GCGTTCCTAC CGGGCGCGGA CAGGGGTCAA TCAGCAAGAC 
CTGGCCGCTC ATCTGGGCAT CAGCCAGCCG CAGGTATCGC GCATCGAGGC GGGCACTGTC
CTGCCGAGAC CGGATGTCGC GAGTGCGATC CGCGCCCTTA TCCATAAACC CGGCAATCGC
GGCCTGTTCG ACGGCCTGAT AACAACAATC CAGTTCAGCC CGCATGTGAC CTGCCTGGTC
CAGCCGGATG GTGACGACAT CCGCTATGTG GCCCTGTCCC GGGGGTTTCG CGAACATCCG
CATTTTCGGA GCATCGAGGT CGGGCAGCGG GTTCGCCAAC AGGCCGGCCG CATCGATGAG
GCGCTCATGC TTGCATCAAT CGGTCGCGGG GCCTTCAACG GCAAGGTAAC GGCAATCGAT
GCGGTCTGGA CGGCCGAATT CGATCATCAT GTGAGCCACT GGCAGGGGAT ACTGACGCCG
GTCCGTTCAA GTGTGGGCGC CTGGTTCCTC CATTGCGCGA TGAAGCCGCT TGCCGAACCG
CAATACCTGG CGCTGATGGC AGACCGAAGC GAACCGATGG TCGTGCACAC CATCAAATGA
 
Protein sequence
MDWGKALRSY RARTGVNQQD LAAHLGISQP QVSRIEAGTV LPRPDVASAI RALIHKPGNR 
GLFDGLITTI QFSPHVTCLV QPDGDDIRYV ALSRGFREHP HFRSIEVGQR VRQQAGRIDE
ALMLASIGRG AFNGKVTAID AVWTAEFDHH VSHWQGILTP VRSSVGAWFL HCAMKPLAEP
QYLALMADRS EPMVVHTIK