| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_R0016 |
|---|
| Symbol | |
|---|
| ID | 4281348 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 419845 |
|---|
| End bp | 422932 |
|---|
| Gene Length | 3088 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 640717801 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTCAAGATAA AAAGAGCGTA TGGTGGATGC CTAGGCGCCA GGAGGCGAAG AAGGACGCGG
CAAGCGGCGA AACGCCACGG GGAGCTGCAA GCGAGCATAG ATCCGTGGAT ATCCGAATGG
GGGAACCCGG CAGAGGCGAA CCTCTGTCAC CCTTACCTGA ACACATAGGG TAAGAGGAGC
GAGACCCGGT GAACTGAAAC ATCTTAGTAA CCGGAGGAAG AGAAATCAAG CGAGATTTCC
TAAGTAGCGG CGAGCGAAAG GGAAAGAGCC CAAACCATGC AGGTGTAAAG GCTGCAGCCG
TTGCCTGTAT GGGGTTGAGG GGTCTGCAGG ACCATACTGC AGTATGGTCA CAGAGTAAGA
AAATATATGT TTAGCTGAAT AAGCTGGAAA GCTCAGCCAC AGAAGGTGAA AGCCCCGTAA
GCGAAAAGCA TATATCTCTG AGCAGAGACC CCGAGTACCG CCGGACACGT GGAACCCGGT
GGGAAGCAGG GAGGACCACC TTCCAAGGCT AAATACTACC TGGCGACCGA TAGAGAAGAG
TACCGTGAGG GAAAGGTGAA AAGCACCCCG GGAGGGGAGT GAAAAGAACC TGAAACCGTA
TGCTTACAAA CAGTAGGAGC ACTATTGGGA AGTGAGAAGT GGGAAGTTAG AAGTGAGAAA
AGGGAAGAAA TCGGCACAGC CGATTTCATC ACAAAATCCC ACCTCCCGCC TCTCACCTCT
CACTTCCCAA GTGTGACTGC GTACCTTTTG TAGAATGGGC CAGCGAGTTA CTGTATTAAG
CAAGGTTAAG TTCAAGAAGG ATGGAGCCGC AGCGAAAGCG AGTCTTAATA GGGCTATATA
GTTTAATGCA GTAGACCCGA AACCGGGTGA TCTATCCATG GCCAGGGTGA AGCGATGGTA
ACACATCGTG GAGGCCCGAA CCAGAGTGCG TTGAAAAGTA CGTGGATGAG TTGTGGATAG
GGGTGAAATG CCAATCGAAC CCGGAGATAG CTGGTTCTCC CCGAAATAGC TTTAGGGCTA
GCGTCAGGAA AAGAGCCTTG AGGGGGTAGA GCACTGGTTA GGCTAGGGGC CTTACACGGT
TACCGAACCT TCCCAAACTC CGAATACCAC AAGGTGCTAC CTGGCAGTCA GACTGTGGGT
GAAAAGGTCC ATAGTCGAGA GGGAAACAGC CCAGACCAAC AGCTAAGGTC CCCAAATCTA
TGCTAAGTGG GAAAGGATGT AGAGCTGCAC AGACAGCCAG GATGTTGGCT TAGAAGCAGC
CACCATTGAA AGAGTGCGTA ATAGCTCACT GGTCAAGTGG CTCTGCGCCG AAAATGTAAC
GGGGCTAAGC ATAGTACCGA AGCTTTGGCA GCGCGCGTAG CGCGCTGGGT AGGGGAGCAT
TCCTAATGGG CAGAAGCTGT ACCGAAAGGA GCAGTGGACT GTTAGGAAGA GAGAATGCTG
GCATGAGTAA GCGAGAAGGC AGGTGAGAAT CCTGCCCGCC GTAAACCTGA GGTTTCCTGG
GGAAGGCTCG TCCGCCCAGG GTAAGCCGGG ACCTAAGCCG AGGCCGCAAG GCGTAGGCGA
TGGACAACTG GTTGAGAATC CAGTGCCACC TGAAGCCGCT ATAAGCGATG GGGTGACGCA
GGAGGATAGG TGAAGCGCAC GGATGGAAGA GTGCGTCCAA GCACGTAGGG TAATGGGCAG
GCAAATCCGC CCATTGAAAA GCCTGAGGTG TGATGGGGAG TGAAATATAG TAGCGAAGTC
ACTGAGTCCA AACTGCCAAG AAAAGCCTCT AGCAAGGTAA CAGGTGCCCG TACCGAAAAC
CGACACAGGT AGGTGAGGAG AGAATCCTAA GGCGCGCGAG AGAACCCTCG TTAAGGAACT
CGGCAAAATG ACCCCGTAAC TTAGGGAGAA GGGGTGCTCT ATTAGCGTGA GTATGTTTAA
CATATATGAG CGTGAGAGAG CCGCAGTGAT CAGGCCCAGG CGACTGTTTA ACAAAAACAC
AGGTCTCTGC CAAATCGAAA GATGAAGTAT AGAGGCTGAC GCCTGCCCGG TGCCGGAAGG
TTAAGAGGAA GTGTTAGCGC AAGCAAAGCA CTGAGCCGAA GCCCCGGTGA ACGGCGGCCG
TAACTATAAC GGTCCTAAGG TAGCGAAATT CCTTGTCTGG TAAGTTCAGA CCCGCACGAA
AGGCGTAACG ATCTGGGCAC TGTCTCGACG AGGGGCTCGG TGAAATTGTA ATACCGGTGA
AGATGCCGGT TACCTGCGAT AGGACAGAAA GACCCCGTGG AGCTTTACTG CAGCTTGATA
TTGAATTTTG GTAGTTGATG TACAGGATAG GTGGGAGACT AAGAAGTGAG GTCGCCAGGT
CTCATGGAGT CAACGGTGGG ATACCACTCT TTAATTGCTG GGATTCTAAC CTGGGCCCGT
AATCCGGGTC AGGGACAGTG TCTGGCGGGC AGTTTGACTG GGGCGGTCGC CTCCCAAAGA
GTAACGGAGG CGCCCGAAGG TTTCCTCAGC GCGGATGGAA ATCGCGCGAA GAGTGTAAAG
GCATAAGGGA GCTTGACTGT GAGAGAGACA TCTCGAGCAG GGACGAAAGT CGGGCTTAGT
GATCCGGCGG TACCGAGTGG AAGGGCCGTC GCTCATCGGA TAAAAGCTAC CCCGGGGATA
ACAGGCTTAT CTCCCCCAAG AGTTCACATC GACGGGGAGG TTTGGCACCT CGATGTCGGC
TCATCACATC CTGGGGCTGG AGAAGGTCCC AAGGGTTGGG CTGTTCGCCC ATTAAAGTGG
TACGTGAGCT GGGTTCAGAA CGTCGTGAGA CAGTTCGGTC CCTATCCATC GCAGGCGCAG
GAGAATTGAG AGGATCTGTC CCTAGTACGA GAGGACCGGG ATGGACAGAC CGCTGGTGTA
CCAGTTGTCT CGCCAGAGGC ATCGCTGGGT AGCTATGTCT GGGACGGATA AGCGCTGAAA
GCATCTAAGC GCGAAGCCAA CCTCAAGATG AGTTCTCCCA CTCCGAGAGG AGGTAAGATC
CCATCAAGAA CAGGTGGTTG ATAGGCCGGG TGTGTAAGTG TAGTGATGCA TTAAGCTGAC
CGGTACTAAT AGATCGAGGT CTTGACCT
|
|---|
| Protein sequence | |
|---|
| |