Gene Swol_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2569 
Symbol 
ID4282298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2928549 
End bp2929403 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content43% 
IMG OID638139453 
Producttranscriptional regulator 
Protein accessionYP_755227 
Protein GI114568073 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000240328 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTAA AACAACTGGA AAGACTACTG GGAAAAAGCA GTGAGGTGAA GGTTACTGGA 
ATACCGGTAG AGAAACTCTA CCCTAACCCC TTTCAACCCC GCAAGGATTT CGATGAGAGG
GAAATGATGG AACTAGCTCA GTCGATTGAA GCTTATGGCA TAATTCAACC CATTATCGTC
CGGACACGCG ATGATGGCTT TCAAATAATT GCGGGAGAAC GCAGATTTCG AGCCTGCTGC
CTGCTGGGGA TAAGAGAAAT ACCAGCCATA ATTCAGGAGA TGGATGATGA AAGGGTAGCT
ACCATCTCGC TGATTGAAAA CCTGCAAAGA CGAGAATTAA ATTATTTCGA AGAAGCCAAT
GCCTATAATC GTTTAATTAA CGGCTTTGGA TTAACCCAGG AGGAACTGGC AAGAAAGATT
GGGAAGAGCC AAGCGGCTAT CGCCAACAAG ATTCGTCTTT TAAAATTACC ACTTTCGGTG
CAGAGCCTAA TTCTACCCGA ACGTATAAGT GAGAGACATG CTAGAGCCTT GCTAAAATTG
AACTCGGCGG AGATGCAACT GGAGGTGGTA AAACAGATAT ATGAGAAAGA ACTAACCGTG
AAAGAAACGG AAGAGCTGGT GGAAGGAATC AGTCGTAACA ACATTCCCCA GGAAATAGGA
AGGAAACCCA AAGGGCAGAG TGTATCCATG GTAATAAGAG ATGCTCGTAT TTTCTTAAAC
ACTATCAGAG AGACGGTTAA ACGAGCACGA CAGACCGGGA TTGATATTGT TATGGTGGAA
AAGGATGTAG ATAGCGAATA CGAGATTACT ATAAGGATTG GAAAACATAA GAAAACCCAA
CAATTGGCTT TATAG
 
Protein sequence
MVLKQLERLL GKSSEVKVTG IPVEKLYPNP FQPRKDFDER EMMELAQSIE AYGIIQPIIV 
RTRDDGFQII AGERRFRACC LLGIREIPAI IQEMDDERVA TISLIENLQR RELNYFEEAN
AYNRLINGFG LTQEELARKI GKSQAAIANK IRLLKLPLSV QSLILPERIS ERHARALLKL
NSAEMQLEVV KQIYEKELTV KETEELVEGI SRNNIPQEIG RKPKGQSVSM VIRDARIFLN
TIRETVKRAR QTGIDIVMVE KDVDSEYEIT IRIGKHKKTQ QLAL