Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2569 |
Symbol | |
ID | 4282298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2928549 |
End bp | 2929403 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638139453 |
Product | transcriptional regulator |
Protein accession | YP_755227 |
Protein GI | 114568073 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000240328 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATTAA AACAACTGGA AAGACTACTG GGAAAAAGCA GTGAGGTGAA GGTTACTGGA ATACCGGTAG AGAAACTCTA CCCTAACCCC TTTCAACCCC GCAAGGATTT CGATGAGAGG GAAATGATGG AACTAGCTCA GTCGATTGAA GCTTATGGCA TAATTCAACC CATTATCGTC CGGACACGCG ATGATGGCTT TCAAATAATT GCGGGAGAAC GCAGATTTCG AGCCTGCTGC CTGCTGGGGA TAAGAGAAAT ACCAGCCATA ATTCAGGAGA TGGATGATGA AAGGGTAGCT ACCATCTCGC TGATTGAAAA CCTGCAAAGA CGAGAATTAA ATTATTTCGA AGAAGCCAAT GCCTATAATC GTTTAATTAA CGGCTTTGGA TTAACCCAGG AGGAACTGGC AAGAAAGATT GGGAAGAGCC AAGCGGCTAT CGCCAACAAG ATTCGTCTTT TAAAATTACC ACTTTCGGTG CAGAGCCTAA TTCTACCCGA ACGTATAAGT GAGAGACATG CTAGAGCCTT GCTAAAATTG AACTCGGCGG AGATGCAACT GGAGGTGGTA AAACAGATAT ATGAGAAAGA ACTAACCGTG AAAGAAACGG AAGAGCTGGT GGAAGGAATC AGTCGTAACA ACATTCCCCA GGAAATAGGA AGGAAACCCA AAGGGCAGAG TGTATCCATG GTAATAAGAG ATGCTCGTAT TTTCTTAAAC ACTATCAGAG AGACGGTTAA ACGAGCACGA CAGACCGGGA TTGATATTGT TATGGTGGAA AAGGATGTAG ATAGCGAATA CGAGATTACT ATAAGGATTG GAAAACATAA GAAAACCCAA CAATTGGCTT TATAG
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Protein sequence | MVLKQLERLL GKSSEVKVTG IPVEKLYPNP FQPRKDFDER EMMELAQSIE AYGIIQPIIV RTRDDGFQII AGERRFRACC LLGIREIPAI IQEMDDERVA TISLIENLQR RELNYFEEAN AYNRLINGFG LTQEELARKI GKSQAAIANK IRLLKLPLSV QSLILPERIS ERHARALLKL NSAEMQLEVV KQIYEKELTV KETEELVEGI SRNNIPQEIG RKPKGQSVSM VIRDARIFLN TIRETVKRAR QTGIDIVMVE KDVDSEYEIT IRIGKHKKTQ QLAL
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