Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2567 |
Symbol | |
ID | 4282296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2926844 |
End bp | 2927686 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638139451 |
Product | transcriptional regulator |
Protein accession | YP_755225 |
Protein GI | 114568071 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.183752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAAAAAA AGGGAAGAGG TCTTGGTAGA GGACTTGAAG CATTACTGTC TAACGAATTA GCTTTTGATG AGACGCAGGA ACTTACACAG ATCAAAGTGG ACGAAATAGT ATTACGCAAA GATCAGCCAC GAAAAAACTT TGATGAAAAG TCCCTTCAAG AACTGGCAGA TTCTATCCAG GAGCATGGTT TGCTACAACC ACTTATTGTA CGGCATAGGC AGGATGGCTT TGAACTGGTG GCGGGAGAGC GACGCTGGCG GGCTGCTCAA ATAGCTGGCT TAATACAGGT GCCGGCTTTA ATAAGAGAAA TGGATGATGT TCAGGCGGCC GAAGTTTCCT TGGTGGAAAA TATACAACGA GATGATTTGA GTGCCGTTGA AGAGGCCATG GCCTACAAAT ATATGATGGA TAATTACGGC TATACCCAGG AAGTACTGGC AGAGAAGCTT GGTAAAAGTC GTCCCCATAT AGCCAACATG GTGCGAATGC TTGCTCTCCC GGAGCAGGTA TTGACGATGC TGGAAAGGCA AGAGATAACA GCCGGACATG CCCGGGCTAT TTTATCCCTG CCAACCGCGG CGGAACAAAT CGCAGCGGCA AAAGAGATAG TTGCCGGGAG ACTTTCGGTA AGGGAAACTG AAAAGAAGGC CAAGTCAATT ATAAAAAGAA AGCAGGTAGA GAAAAAGAGA GATCCGGTAA TAATGGAATT GGAAGAGCGA ATGGAGAGCT ATTTTAGTTC CCGGACGAAA GTGATGCAAA AGGGCAGGGG AGGAACCATT GAAATAAGCT TTTATAGCCT GGAAGATCTG GAACGAATAG TAGAGCTTAT AGGCTTGGAG TAA
|
Protein sequence | MQKKGRGLGR GLEALLSNEL AFDETQELTQ IKVDEIVLRK DQPRKNFDEK SLQELADSIQ EHGLLQPLIV RHRQDGFELV AGERRWRAAQ IAGLIQVPAL IREMDDVQAA EVSLVENIQR DDLSAVEEAM AYKYMMDNYG YTQEVLAEKL GKSRPHIANM VRMLALPEQV LTMLERQEIT AGHARAILSL PTAAEQIAAA KEIVAGRLSV RETEKKAKSI IKRKQVEKKR DPVIMELEER MESYFSSRTK VMQKGRGGTI EISFYSLEDL ERIVELIGLE
|
| |