Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2553 |
Symbol | |
ID | 4282317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2911106 |
End bp | 2911873 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638139437 |
Product | ABC transporter related |
Protein accession | YP_755211 |
Protein GI | 114568057 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTCT TGCAGATAAA TAATTTATAC AAATCCTTTG GCGGGCTCAG CGCAGTGCTG GATTTCAACT TCCACCTGGA AGACGGTGAA CTGCTGGGTC TGATTGGACC CAATGGAGCC GGTAAAACCA CGGTCTTTAA TCTGATTACC GGGGTATATA AGCCGGATGA GGGTAATATT ATTTTTTCGG GACGAGATAT CACCGGTTTA GCTCCCTATA CTATTTGCCA GCAGGGAATC GCCCGCACCT TCCAAAACAT CCGGCTGTTT AAAGACATCA GCGTTTTGGA CAATGTACGC ATTGCTTTGC ATAAAGATGC ACCCTATGGC TTGCTGAAAA CTCTGCTTAG AACCCCGGGC TTTTTCCAGG GGGAAATAGA GATAAATAAA CAGGCCCACG AATATTTGCA GATATTCAAC CTGGAGGATA AAGCCGGCGA AATAGCTTCC AGCTTGCCCT ATGGGGAACA GAGAAGATTA GAAATTGCTC GGGCTCTGGC CACCAAACCA ACTCTATTGA TACTGGATGA GCCGGCTGCA GGAATGAATC CCAATGAAAC CCGGGAATTA ATGGACTTGA TACGCTGGAT CAGGAAAGAC TTTGGTCTTA GCATACTGTT GATTGAACAC GATATGTCTT TGGTCATGGG CGTTTGCGAG CGCATCTATG TTTTGGACTA TGGGCAGGTT ATTGCTGAAG GCCTGCCGGA AGAAATAAGG CGAAATAAAC GGGTAATCGA AGCTTACCTG GGAGAGGAAG TCGGATAG
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Protein sequence | MSLLQINNLY KSFGGLSAVL DFNFHLEDGE LLGLIGPNGA GKTTVFNLIT GVYKPDEGNI IFSGRDITGL APYTICQQGI ARTFQNIRLF KDISVLDNVR IALHKDAPYG LLKTLLRTPG FFQGEIEINK QAHEYLQIFN LEDKAGEIAS SLPYGEQRRL EIARALATKP TLLILDEPAA GMNPNETREL MDLIRWIRKD FGLSILLIEH DMSLVMGVCE RIYVLDYGQV IAEGLPEEIR RNKRVIEAYL GEEVG
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