Gene Swol_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2553 
Symbol 
ID4282317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2911106 
End bp2911873 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content47% 
IMG OID638139437 
ProductABC transporter related 
Protein accessionYP_755211 
Protein GI114568057 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCT TGCAGATAAA TAATTTATAC AAATCCTTTG GCGGGCTCAG CGCAGTGCTG 
GATTTCAACT TCCACCTGGA AGACGGTGAA CTGCTGGGTC TGATTGGACC CAATGGAGCC
GGTAAAACCA CGGTCTTTAA TCTGATTACC GGGGTATATA AGCCGGATGA GGGTAATATT
ATTTTTTCGG GACGAGATAT CACCGGTTTA GCTCCCTATA CTATTTGCCA GCAGGGAATC
GCCCGCACCT TCCAAAACAT CCGGCTGTTT AAAGACATCA GCGTTTTGGA CAATGTACGC
ATTGCTTTGC ATAAAGATGC ACCCTATGGC TTGCTGAAAA CTCTGCTTAG AACCCCGGGC
TTTTTCCAGG GGGAAATAGA GATAAATAAA CAGGCCCACG AATATTTGCA GATATTCAAC
CTGGAGGATA AAGCCGGCGA AATAGCTTCC AGCTTGCCCT ATGGGGAACA GAGAAGATTA
GAAATTGCTC GGGCTCTGGC CACCAAACCA ACTCTATTGA TACTGGATGA GCCGGCTGCA
GGAATGAATC CCAATGAAAC CCGGGAATTA ATGGACTTGA TACGCTGGAT CAGGAAAGAC
TTTGGTCTTA GCATACTGTT GATTGAACAC GATATGTCTT TGGTCATGGG CGTTTGCGAG
CGCATCTATG TTTTGGACTA TGGGCAGGTT ATTGCTGAAG GCCTGCCGGA AGAAATAAGG
CGAAATAAAC GGGTAATCGA AGCTTACCTG GGAGAGGAAG TCGGATAG
 
Protein sequence
MSLLQINNLY KSFGGLSAVL DFNFHLEDGE LLGLIGPNGA GKTTVFNLIT GVYKPDEGNI 
IFSGRDITGL APYTICQQGI ARTFQNIRLF KDISVLDNVR IALHKDAPYG LLKTLLRTPG
FFQGEIEINK QAHEYLQIFN LEDKAGEIAS SLPYGEQRRL EIARALATKP TLLILDEPAA
GMNPNETREL MDLIRWIRKD FGLSILLIEH DMSLVMGVCE RIYVLDYGQV IAEGLPEEIR
RNKRVIEAYL GEEVG