| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2546 |
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| Symbol | |
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| ID | 4282310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 2902839 |
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| End bp | 2905253 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638139431 |
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| Product | Signal transduction histidine kinase-like protein |
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| Protein accession | YP_755205 |
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| Protein GI | 114568051 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTTTCA GCAAATTTCC AGAAGATATT AAAAAACCTT CTTTTATATT ATCCGAAAAA
TTGCTGGCTT CAATATTTGA TTCTCTTCCC GATGCGGTAT TGGTTATTGA TATCAACAAA
AAAATCATAG CCTGGAACCG CGCCCTGGAA AAAATGACGG GGATTACAAC TGCACAAATG
CTTGGTAAAA GCAATTATGA GTATAGCCTT CCTTTTTATA GGACAAGGCG TCCCCTGCTT
ATCGATTATG TATTAAAACC TGAGCAGAAT ATACCCAGGG AATACTTGTC TCTTGGCCGG
GAAAGTGACG CTATGGTATG TGAGAATATT ATTCATATCG AAGGTCAGGA AGAACTATAC
CTCTGGGCCA GGGCTGCACC CTTATACGAC CAAAACGGTG AGCTGGTGGG AGCAATTGAA
TCCATTAGGG ATATTACTGC ACAAAAAAGA ATTGAAAAGG CCATTGGCAA CAATGAGCAA
CGGCTCCGTT ATATTGCCGA ACATTTATTG GATATTATTA TTGAAATCGA TAAAAGAGGC
TTAATTAAAT ATAATAGTCC CTCCCCTACT CTTTTTCTAA AACATAATCC CGAAGAACTA
ATGGGAAAGC CCATCTATAA CCTGCTGCAT CCCAATGATA TCATGCTTCT GACTACAACT
CTTAAGGAAG TAATAAAAAA CAAAGTATCC AAATCGCTTG AAATTCGCAT TAAAGATAGC
GAAGGAGATT ATCATTGGGT TGAACTCGTA GTAAATCCAC AATTTAATAA TAACAGCGAA
GTTGCTGGAG CCATCTGTGT AGGACGAGTG GTAACGGAAC GCAAACTCGC CGAGGATGCT
CTGAAAGCCA GTGAGGAAAG GTACCGCGAG CTTTTTGAAA ACGCCAATGA TATTGTCTTT
ATTCAAGACA TTAGCGGGCC ATACCTGGAC TTTAACAAGG CGGCGCAAGC TACTACTGGT
TTTACCAGGG AGGAACTTCT GAGTATCAGC ATGGAGCGCT TGGTGGCTCC TGAGTACCTG
GATTTGACCA AAGAGATGAT GAAGCAAAAG ATTAATCAAG GGGGAGCAAC GCGTTACGAG
ATTGAACTAA TCGGGAAAAA CCGGAATATA ATCCCTGTCG AAGTAAGCAG CCGTTTAATC
AGATATAGTG ACCAAAGCAT AGCCATACAG GGTACCGCTC GCGATATAAC CAAACGCCGA
CAAGCGGAAA AAGCTCTGGC AGCGGAAAAA GAGCGGCTGG CGTTAATTCT TAGCCGTATC
GGTCATGGGA TAATTACTAC AGATAATAAC GGGGTTATCA CCTTTATCAA TACAGAAGCA
GAACGTTTTT TTGAGTGGAA GAATGAATAT GCCCGGGGTA AAAACATGTT AGATGTGGTG
CCTCTGGTTG AAGATTATAC TAATCTCAAC CGCAGCCTCC TCCTGGCCTA CAACCAAAAA
CAGCACCCAG TGGATATACG CATCATAAAC AACCTGGGAC AAATCAGCCT TTTGTCTACT
ACGGTCACCC ATATTCCGGG GAATAACGGA AATAACCATG GTATGGTTTT CGTTTTTCGG
GATGTAACCG AATTGCGCAA AGCCGAATCC CAGTTGGCTC TATCTCAAAA ATTAGAATCT
ATCGGCCAGC TGGCCGCAGG CATTGCCCAT GAGATAAACA ACCCCATGCA GTATATCGGG
GATAACCTAT CCTTTCTAAA TGAGGCCTTT GCCAATATTT TCTCCATATT AGAGCAAGTC
AAAGCACTTG CCAGTTCCCA AGATATATCG TCATCTATTC TAGATTTAGT AAAACTCTTA
GAAAAATCCC AAAGGGAACT TGATTTCTTT CGAAATGAGA TTCCCCAGGC TATTCAACAA
TCCCTCGAAG GGGTAACAGG CGTTTCTGAT ATTGTGACCG CTCTAAGGAA TTTTGCTCAC
CCCGGATTCG GCGAAAAACA AATAGCCAAC ATCAACAATG CCATAATGGG AACGGTCTCC
ATTGCTAAAA ATGAATGGAA ACACTTAGCA GATCTGGAGT TGAATCTGGG TAACGATCTT
CCTGCTGTTA AAATGGTGGT TAATCAAATT AACCAGGTGC TATTGAATAT AATTGTTAAC
GCCTCGCACA GCATACAGGA CGCCATTGAA AAGGGCCTTT ACCCCAAGGG AAAAATTGTT
GTTAGTAGCC TGATAAATGA ATCTTATGTT GAGATACGAA TTTCCGATAA CGGTATGGGT
ATTCCCGATA CAATAATAAA TAAAGTATTT GATCCCTTTT TTACTACCAA AGAGGTTGGT
AAGGGCACCG GTCAGGGCCT GGCCATTTCC CATGATATCA TCGTAAATAA GCATAATGGG
TCGATTGAGC TGGAATCCGA AGTTGGCCGG GGTACCACTT TCTATATTAG ATTGCCCATT
GAGGGTTCGA TATGA
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| Protein sequence | MVFSKFPEDI KKPSFILSEK LLASIFDSLP DAVLVIDINK KIIAWNRALE KMTGITTAQM
LGKSNYEYSL PFYRTRRPLL IDYVLKPEQN IPREYLSLGR ESDAMVCENI IHIEGQEELY
LWARAAPLYD QNGELVGAIE SIRDITAQKR IEKAIGNNEQ RLRYIAEHLL DIIIEIDKRG
LIKYNSPSPT LFLKHNPEEL MGKPIYNLLH PNDIMLLTTT LKEVIKNKVS KSLEIRIKDS
EGDYHWVELV VNPQFNNNSE VAGAICVGRV VTERKLAEDA LKASEERYRE LFENANDIVF
IQDISGPYLD FNKAAQATTG FTREELLSIS MERLVAPEYL DLTKEMMKQK INQGGATRYE
IELIGKNRNI IPVEVSSRLI RYSDQSIAIQ GTARDITKRR QAEKALAAEK ERLALILSRI
GHGIITTDNN GVITFINTEA ERFFEWKNEY ARGKNMLDVV PLVEDYTNLN RSLLLAYNQK
QHPVDIRIIN NLGQISLLST TVTHIPGNNG NNHGMVFVFR DVTELRKAES QLALSQKLES
IGQLAAGIAH EINNPMQYIG DNLSFLNEAF ANIFSILEQV KALASSQDIS SSILDLVKLL
EKSQRELDFF RNEIPQAIQQ SLEGVTGVSD IVTALRNFAH PGFGEKQIAN INNAIMGTVS
IAKNEWKHLA DLELNLGNDL PAVKMVVNQI NQVLLNIIVN ASHSIQDAIE KGLYPKGKIV
VSSLINESYV EIRISDNGMG IPDTIINKVF DPFFTTKEVG KGTGQGLAIS HDIIVNKHNG
SIELESEVGR GTTFYIRLPI EGSI
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