Gene Swol_2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2516 
Symbol 
ID4282532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2869888 
End bp2870880 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content39% 
IMG OID638139400 
Producthypothetical protein 
Protein accessionYP_755175 
Protein GI114568021 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CCATTTATGT TTTTAATGAA GGAAAATTTA AACGCAAAGA CAATACCCTG 
TATTTTGAAA CCGAACAGGG TAAGCGCTAT ATCCCGGTGG AGGATATTAA TGAAATCCAT 
GTTTATGGGG AAGTAGACCT GAACAAACGC TTTTTGGAAT TCCTCACCCA AAAAGAGATA 
ATACTTCATT TTTATAATAA CTATGGTTAT TACAGCGGCT CTTATTATCC CCGCGAACAT 
CTTAACTCCG GGTACATGAC TTTACACCAG GCAGAACACT ACCTGGATGA GCAACGCCGT 
TTGATGCTAG CGAAATTATT TGTTCAGGGA GCATCGGCTA ATATGCTGGA AGTATTAAAG 
TATTATCATA ACAGGGGTAA AGATCTTACC CGGGCCCTTC AAAGCATAGG TAATCTGATA 
GATAGGATAG ATGAATCGGT TTCAGTTGAA GTATTAATGG CGGTTGAAGG GAATATCAGA 
GATGCGTATT ACAGTGCTTT CAATACTATA ATTGATAAAA GCGATTTTCT TTTCGAAGGT 
AGAAACCGGC GTCCGCCCCG CGATCGTATA AATGCTTTGA TCAGTTTTGG CAATACCATG 
ACATACACAG CCTGTTTGAG TGAAATATAC CGGACTCATC TGGATCCACG AATCTCCTAT 
TTGCATACTA CAAACTTCAG GAGATTCAGC TTAAACTTGG ACATTGCAGA AATATTCAAA 
CCAATATTAG TCGACCGAAT AATATTTTAT TTGCTGGCCC GTAACATGCT ACGCTCCACG 
CATTTTGAAA ATAAGATGGG TGGAATTCTG CTAAATGATA AAGGACGCCA GGTATTTGTA 
AACGAATGGG AAAAACGCCT GCGTACTACA ATAAAGCACC GGGATATAGG CCATGAAGTG 
TCTTATCGGA GATTAATAAG ATTGGAATTA TATAAACTGG AGAAACACCT GATAGGGGAA 
AAGCTTTACA AAGCCTATGT TAGCCGTTGG TAG
 
Protein sequence
MKKAIYVFNE GKFKRKDNTL YFETEQGKRY IPVEDINEIH VYGEVDLNKR FLEFLTQKEI 
ILHFYNNYGY YSGSYYPREH LNSGYMTLHQ AEHYLDEQRR LMLAKLFVQG ASANMLEVLK 
YYHNRGKDLT RALQSIGNLI DRIDESVSVE VLMAVEGNIR DAYYSAFNTI IDKSDFLFEG 
RNRRPPRDRI NALISFGNTM TYTACLSEIY RTHLDPRISY LHTTNFRRFS LNLDIAEIFK 
PILVDRIIFY LLARNMLRST HFENKMGGIL LNDKGRQVFV NEWEKRLRTT IKHRDIGHEV 
SYRRLIRLEL YKLEKHLIGE KLYKAYVSRW