Gene Swol_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2486 
Symbol 
ID4282650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2821539 
End bp2822651 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content44% 
IMG OID638139371 
Productferrichrome-binding periplasmic protein 
Protein accessionYP_755146 
Protein GI114567992 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA TAAAAAAATA TAATAATAAA GCTATTTTGC GCAGCTTATT GATCGTATTC 
CTACTACTAA GCCTGTTGCT GTCTAGTGCT TGCAGTAAAG AGGAAAACAG GGAAACAGTA 
CCTTCTGCAA ATACCAGGAC GATTACGGAT TGTATCGGTC GGGAAGTAAA AGTCCCGGTC 
CAAATAAACC GGATCGCCTG CCTCTGCCCG GAATCAGCAT ACACTCTAGC TATGTTTGGC 
CAGGGGGATA AAATGGTAGC GGTGGTAGGT GGGGTTAAGA GAGATCTTAT CCTTACGGAA 
ATGTATCCCG GGATAAAAGA TTTGCCAGTA CCTAAGAGCA GTGCCGTAAT AAATATTGAG 
GAATTGGTGA AAACTGACCC CGATGTAGTT TTTGTTAAGA AAGATAGCTT CAGTAGTGAA 
GCTGAGGTTC AGAAGCTAAA CAAAAGCAAG CTTCCCTTCC TGGTAATAGA TTTTAACAGT 
ATGAAAGAAC AACAGTATGC GATAGAAATG ATGGGCTTGG TATTAGGTGC AGATGATAAG 
GCCCAAAAAT TCAATGACTA TTATCAAAAT TGCATTGAGC GCGTGCAAAA ACGGGTAGGA 
CTTATTCCCC AGGAGAAAAG GGCAAAGGTT TACCACTCTA TTAACGAAGC TACCCGTACG 
GATATAAAAG GGAGTCTTTC GGCGGACTGG CTTGAGGCGG CTGGAGCTGA CAATGTTTCG 
ATCGATAAGA ATTTAAAGAC CTTGGAGGGA AAGTATTTCG CCAGCCTGGA ACAGATTTTA 
TTATGGAATC CTGAGGTAAT ATTGGTAAAT GAAATAGGAG TAGCCGATTA TATTTTGACT 
AATACTCAAT GGGCACCCTT GCAGGCGGTG AAAAACAAGA AGGTTTGGCA GTTACCCAAT 
GGTATATCCC GCTGGGGTCA TCCCTCTTCG CCCGAAACCC CCCTGGCAAT TTTGTGGACG 
GCCCAGACCT TATATCCGGA GAAGTTTCTT GACCTGGATA TGGCGGCGGA AACCAGATCA 
TTTTATAAGG ATTTCTTCGG GCTGGAACTA TCGGAGGAAG TAGTTGACAG AATTATTGCC 
GGGGAAGGGA TGCGTATAGC TCGTTCCCAG TAA
 
Protein sequence
MKMIKKYNNK AILRSLLIVF LLLSLLLSSA CSKEENRETV PSANTRTITD CIGREVKVPV 
QINRIACLCP ESAYTLAMFG QGDKMVAVVG GVKRDLILTE MYPGIKDLPV PKSSAVINIE 
ELVKTDPDVV FVKKDSFSSE AEVQKLNKSK LPFLVIDFNS MKEQQYAIEM MGLVLGADDK 
AQKFNDYYQN CIERVQKRVG LIPQEKRAKV YHSINEATRT DIKGSLSADW LEAAGADNVS 
IDKNLKTLEG KYFASLEQIL LWNPEVILVN EIGVADYILT NTQWAPLQAV KNKKVWQLPN 
GISRWGHPSS PETPLAILWT AQTLYPEKFL DLDMAAETRS FYKDFFGLEL SEEVVDRIIA 
GEGMRIARSQ