| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2485 |
|---|
| Symbol | |
|---|
| ID | 4282649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2820641 |
|---|
| End bp | 2821369 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638139370 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_755145 |
|---|
| Protein GI | 114567991 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAT ATGTTGCTAT AGACGATACG GACAGCCTGG AATTTGGGGC TACCGGTCAA
TCTGCCAATG AACTGCGCAG GCTCATTGAA GATAAGGGTT GGGGGAAAAG CGAAGCGGTA
ACCCGGCACC AGCTATTATT GCATCCAGAT ATACCATATA CTTCCCATAA TAGCTCCATG
TGTTTTAAGG CAGTTATTGG GGGCGACAAC TTGGATGAAT TCATCACTTC TGCGGCCAAA
TTTCTCCAGG AAACCAGTGC AGCAGGCTCA GATCCAGGAT TGTGTGTAGC TGTGAAAGAA
CGGATAAAAA ACCTGGAGGA ACTGTTGAGC TTTGGATACA AGGCCAAAGT CGAAATTTTG
AGCAAGGCAG AAGCCTATAA AACGGCGGAA CACTGTGGCC TTCATCTCTC TGAACACGGC
GGTACCGGAT TGGGCATAAT CGGGGCCTTA GCCGGTATTG GATTGCGGAT AACCGGAAAT
GATGGAAGAT TCCAGGGAAG AATTCAGCTG GGCAATAGTG GCGAAACAAT TGCTGTAGGG
GAAATTATTG CGCAAACAGA AATAGATGAA GTACGATCGA TAGACGGGCA GGTACTGGCT
AGCGATGAAA CACTGGTAAT AGGTGAGAAA ATTAAAAGCG TTCTGCTTGA GGGTAAAAGG
ATACTCCTGG TTTATCGTGA GGGAGGAGCC TGGCATAGTT GTAATAATAA GCAACTGAAG
AATTATTGA
|
|---|
| Protein sequence | MEIYVAIDDT DSLEFGATGQ SANELRRLIE DKGWGKSEAV TRHQLLLHPD IPYTSHNSSM
CFKAVIGGDN LDEFITSAAK FLQETSAAGS DPGLCVAVKE RIKNLEELLS FGYKAKVEIL
SKAEAYKTAE HCGLHLSEHG GTGLGIIGAL AGIGLRITGN DGRFQGRIQL GNSGETIAVG
EIIAQTEIDE VRSIDGQVLA SDETLVIGEK IKSVLLEGKR ILLVYREGGA WHSCNNKQLK
NY
|
|---|
| |