Gene Swol_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2458 
Symbol 
ID4283683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2788642 
End bp2789826 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content52% 
IMG OID638139342 
Producthypothetical protein 
Protein accessionYP_755118 
Protein GI114567964 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCG GGGAACTGAT TCTGGTCGCC ATTGAGAGTA TAAAAAGCAA TAAACTAAGA 
TCCTTTCTTA CCACCCTGGG AATTGTTATC GGCATTGCCG CGGTAATTGC CGTGGTGGGC
ATCGGGCAGG GCGGCCGGGC CATGTTGATG CAGGAAATGG AGAAATTCGG CACCAATATG
TTCGGCATCT GGGTAAATTA CCGGGATGGT GAAAGCTTCC GCCTGGACGA CCTGCAGATT
AATGATATAA CAGTTATCAA GGAAAATGTC CCCCAGGTGA AATACCTGGC TCCGGCAAGC
TATGGCCAGA TGCAGTTAAG GGGCAGCAAG GGCCATAAAT CCGTACAGGT GATAGGCACC
ACTGCCGACT ATGCCCAGGT TAGAAACCTG GAAACCGTCT GGGGCAGGTT CATCCGTGAT
GATGATGCGG CAGTAGGCAG AAGGGTTATT GTGCTTGATG AAAGAACCGC CTTAAAGCTT
TTTGGGCCTG GCAACCCGGT GGGTAAAAAG GTAATGCTCA TGAGCAATTC GGCAGTAGTA
GTGGGGGTAA TAAAAAGCGA CAGTTCCATG CTGGGCTTTA ATTCCCAGCA AATAGCCTAT
CTGCCCTGGT CATTTTTAAG CCGGCTTAAC GGCTGGGAAG TAATCCATGA ATTGCAGGGC
AGCGCCAGCA GCAAAGAAGA GGTCGAAGCA GCCATGAACC TGAGCAAGAA GATCCTGGAA
AGAAGGCATC ATGCCCCCAA TCATTACTAT GCCTACAGTC TGGAACAGGA GATGGAGTCG
GCTAACAAAG TTACGGGGAT TATGACCCTT GTTATCGGCT GTATAGCAGG CATATCCTTG
CTGGTGGGGG GAATCGGGGT AATGAACATA ATGCTGGTAT CAGTAACCGA GCGCACCCGC
GAAATAGGCA TTAGAATGGC CCTGGGCGCC CGCCGCAAGG ACATCCTGGT GCAATTTATC
ATTGAATCAA TTGTCCTCTG CCTCCTGGGG GGGTTCATTG GCATAATTCT GGGATATGGC
GGGGCTTTGC TGGTAGCCCG GCTGGCCAAG TGGCCGCCGC TGGTTTCCGG ATGGACGGTA
TTGCTGGCCG TGGGGTTTTC CGTAGCGGTC GGCCTGTTCT TCGGCATTTA CCCGGCCAAT
AAAGCCTCCA AAATGGACCC CATCGAAGCC CTGAGGAGAG ATTAA
 
Protein sequence
MNIGELILVA IESIKSNKLR SFLTTLGIVI GIAAVIAVVG IGQGGRAMLM QEMEKFGTNM 
FGIWVNYRDG ESFRLDDLQI NDITVIKENV PQVKYLAPAS YGQMQLRGSK GHKSVQVIGT
TADYAQVRNL ETVWGRFIRD DDAAVGRRVI VLDERTALKL FGPGNPVGKK VMLMSNSAVV
VGVIKSDSSM LGFNSQQIAY LPWSFLSRLN GWEVIHELQG SASSKEEVEA AMNLSKKILE
RRHHAPNHYY AYSLEQEMES ANKVTGIMTL VIGCIAGISL LVGGIGVMNI MLVSVTERTR
EIGIRMALGA RRKDILVQFI IESIVLCLLG GFIGIILGYG GALLVARLAK WPPLVSGWTV
LLAVGFSVAV GLFFGIYPAN KASKMDPIEA LRRD