Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2458 |
Symbol | |
ID | 4283683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2788642 |
End bp | 2789826 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638139342 |
Product | hypothetical protein |
Protein accession | YP_755118 |
Protein GI | 114567964 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCG GGGAACTGAT TCTGGTCGCC ATTGAGAGTA TAAAAAGCAA TAAACTAAGA TCCTTTCTTA CCACCCTGGG AATTGTTATC GGCATTGCCG CGGTAATTGC CGTGGTGGGC ATCGGGCAGG GCGGCCGGGC CATGTTGATG CAGGAAATGG AGAAATTCGG CACCAATATG TTCGGCATCT GGGTAAATTA CCGGGATGGT GAAAGCTTCC GCCTGGACGA CCTGCAGATT AATGATATAA CAGTTATCAA GGAAAATGTC CCCCAGGTGA AATACCTGGC TCCGGCAAGC TATGGCCAGA TGCAGTTAAG GGGCAGCAAG GGCCATAAAT CCGTACAGGT GATAGGCACC ACTGCCGACT ATGCCCAGGT TAGAAACCTG GAAACCGTCT GGGGCAGGTT CATCCGTGAT GATGATGCGG CAGTAGGCAG AAGGGTTATT GTGCTTGATG AAAGAACCGC CTTAAAGCTT TTTGGGCCTG GCAACCCGGT GGGTAAAAAG GTAATGCTCA TGAGCAATTC GGCAGTAGTA GTGGGGGTAA TAAAAAGCGA CAGTTCCATG CTGGGCTTTA ATTCCCAGCA AATAGCCTAT CTGCCCTGGT CATTTTTAAG CCGGCTTAAC GGCTGGGAAG TAATCCATGA ATTGCAGGGC AGCGCCAGCA GCAAAGAAGA GGTCGAAGCA GCCATGAACC TGAGCAAGAA GATCCTGGAA AGAAGGCATC ATGCCCCCAA TCATTACTAT GCCTACAGTC TGGAACAGGA GATGGAGTCG GCTAACAAAG TTACGGGGAT TATGACCCTT GTTATCGGCT GTATAGCAGG CATATCCTTG CTGGTGGGGG GAATCGGGGT AATGAACATA ATGCTGGTAT CAGTAACCGA GCGCACCCGC GAAATAGGCA TTAGAATGGC CCTGGGCGCC CGCCGCAAGG ACATCCTGGT GCAATTTATC ATTGAATCAA TTGTCCTCTG CCTCCTGGGG GGGTTCATTG GCATAATTCT GGGATATGGC GGGGCTTTGC TGGTAGCCCG GCTGGCCAAG TGGCCGCCGC TGGTTTCCGG ATGGACGGTA TTGCTGGCCG TGGGGTTTTC CGTAGCGGTC GGCCTGTTCT TCGGCATTTA CCCGGCCAAT AAAGCCTCCA AAATGGACCC CATCGAAGCC CTGAGGAGAG ATTAA
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Protein sequence | MNIGELILVA IESIKSNKLR SFLTTLGIVI GIAAVIAVVG IGQGGRAMLM QEMEKFGTNM FGIWVNYRDG ESFRLDDLQI NDITVIKENV PQVKYLAPAS YGQMQLRGSK GHKSVQVIGT TADYAQVRNL ETVWGRFIRD DDAAVGRRVI VLDERTALKL FGPGNPVGKK VMLMSNSAVV VGVIKSDSSM LGFNSQQIAY LPWSFLSRLN GWEVIHELQG SASSKEEVEA AMNLSKKILE RRHHAPNHYY AYSLEQEMES ANKVTGIMTL VIGCIAGISL LVGGIGVMNI MLVSVTERTR EIGIRMALGA RRKDILVQFI IESIVLCLLG GFIGIILGYG GALLVARLAK WPPLVSGWTV LLAVGFSVAV GLFFGIYPAN KASKMDPIEA LRRD
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