Gene Swol_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2457 
Symbol 
ID4283682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2787911 
End bp2788645 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID638139341 
ProductABC-type transport systems, involved in lipoprotein release, ATPase components 
Protein accessionYP_755117 
Protein GI114567963 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGA TAAATAATCT CAGCAAAACC TATTCCACCG GCGCCTTTAC CGTACCGGCA 
TTAAAGGGAA TCACCCTGGA TATTGCCCCC GGCGAATTCG TGGCCATCAC CGGAGCTTCG
GGTTCGGGTA AATCCACCAT GATGAATCTC CTGGGCTTGC TGGACCGTCC CAGCGAGGGG
AGTTACCTGC TGGACGGCAT GGATGTATCC AACCTGAATG ATGATGACTA TGCCCGCTTA
AGAAATCGCA AAATCGGTTT TGTTTTTCAA GCTTTTAATC TCCTGCCGCG TTTGACTGCC
TTGAAAAATG TAGAGTTATC CATGCTTTAT GCAGGCACAA AGCACGAAGA GCGCCGGAAG
AGAGCGCTGG AAGTCTTGAC CCTACTGGGC CTGGAAGACC GGCTGCATCA TTTTCCCAAT
GAATTGTCCG GGGGGCAGAA CCAGCGGGTG GCCATCGCCC GGGCTCTGAT CAACAACCCG
GCCATAATCC TGGCTGACGA GCCTACCGGA GCCCTGGATA GCCAGACCGG CCTGGAGATA
ATGAGCATAT TTCAAGAATT AAACCGCCAG GGAACCACCA TAGTTCTGGT TACTCACGAA
TTAAACATTG CCCGGCACTC CCGGCGCATA CTTCGTATGG CTGACGGCTT GATAATAAAC
GATGAGGAAA TAGCCCGGCC CCTTGATGCC CATAACGAAA TCCAGGCACT CCGGGAAAAG
GGGGGCAGGG CATGA
 
Protein sequence
MIKINNLSKT YSTGAFTVPA LKGITLDIAP GEFVAITGAS GSGKSTMMNL LGLLDRPSEG 
SYLLDGMDVS NLNDDDYARL RNRKIGFVFQ AFNLLPRLTA LKNVELSMLY AGTKHEERRK
RALEVLTLLG LEDRLHHFPN ELSGGQNQRV AIARALINNP AIILADEPTG ALDSQTGLEI
MSIFQELNRQ GTTIVLVTHE LNIARHSRRI LRMADGLIIN DEEIARPLDA HNEIQALREK
GGRA