| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2433 |
|---|
| Symbol | |
|---|
| ID | 4283607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 2762813 |
|---|
| End bp | 2763337 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638139317 |
|---|
| Product | peptidylprolyl isomerase |
|---|
| Protein accession | YP_755093 |
|---|
| Protein GI | 114567939 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00223401 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATA ATCCACTGGT AACTATCCAG ATGGAAAACG GGGGGCTGAT AAAGGCGGAA
CTTTTTCCTG CTGTAGCTCC CAATACGGTC AACAATTTTA TCTCCCTGAT AAAAAAGGGG
TTTTATAATG GCCTGGTCTT TCACCGGGTT ATTCCCGGCT TTATGATTCA GGGCGGATGT
CCCCAGGGTA GCGGAACAGG GGGCCCTGGC TACAGTATCA AAGGGGAGTT CAGCAGTAAT
GGCTTTCCCA ACCATCTCTC CCACGAAAGA GGTGTTCTTT CCATGGCCAG GACGGCCGTT
CCTAATTCCG CTGGTTCCCA GTTTTTCATT ATGGTAGCTC CCGCCCCTCA TCTGGATGGC
GATTACGCCG CTTTCGGCCA GGTAATTGAA GGCCTGGAAG TAGTGGATCA GATTGTAAAG
GCAGCTCGGG ATTTCCGGGA TAAACCTCGA GAAGCTCAAA GGATGCTCAG CGTTAGTATA
GATACATTTG GTCAGGAATA CCCTGAAGTA GAAAATTTTT CTTAA
|
|---|
| Protein sequence | MNNNPLVTIQ MENGGLIKAE LFPAVAPNTV NNFISLIKKG FYNGLVFHRV IPGFMIQGGC
PQGSGTGGPG YSIKGEFSSN GFPNHLSHER GVLSMARTAV PNSAGSQFFI MVAPAPHLDG
DYAAFGQVIE GLEVVDQIVK AARDFRDKPR EAQRMLSVSI DTFGQEYPEV ENFS
|
|---|
| |