Gene Swol_2419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2419 
Symbol 
ID4281823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2749095 
End bp2749724 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID638139303 
Producthypothetical protein 
Protein accessionYP_755079 
Protein GI114567925 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000960503 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA GGTGGTTGGG ACATGCCTCT TTTTTAATTG AAACCGGGAA AGAACGGATA 
ATAACCGACC CTTTTGATGA AAGGGCCGGC TATGCTGTTT TTACGGAGAC GGTGGATATT 
GCTACCGTAA GTCATGAACA CTGGGATCAT AACGCGGTTG GGATTCTCGC CGGAAAGCCT 
CAAGTTATCC GGGGAGAAGG AGAATTCTGC CTGGGAGGAA TAACTATTAC GGGTTTTTCC 
TCCTTCCATG ACCAGACCCG GGGTCGAGAC CGGGGTAAAA ACACCATATA CAAAATATCG 
GCAGAAGGTA TGGAACTGCT TCACCTGGGG GATTTAGGCC ATATTCTTTC TCCCCGGGAA 
ATCGAGGCCA TAGGGCAGGT GGATATTTTG CTGCTTCCGG TGGGTGGTAC TTATACCATT 
GATGCCAGGC AGGCTTTAGA AACCATGCAG CAACTGAATC CCAGGATTAC CATACCGATG 
CATTACCAAA CCCCGCATGT TAAAATAAGC CTGGCACCAT TGGAGGCCTT TACCGGTCAC 
TTGGAACGGG TGGTAAAACG GCCCTTCCTG GAGATTACAC GGGAAGAGTT ACCGGAAGAA 
CCCCTGGTGG TAGTATTGGA TTACTTGTAG
 
Protein sequence
MKIRWLGHAS FLIETGKERI ITDPFDERAG YAVFTETVDI ATVSHEHWDH NAVGILAGKP 
QVIRGEGEFC LGGITITGFS SFHDQTRGRD RGKNTIYKIS AEGMELLHLG DLGHILSPRE 
IEAIGQVDIL LLPVGGTYTI DARQALETMQ QLNPRITIPM HYQTPHVKIS LAPLEAFTGH 
LERVVKRPFL EITREELPEE PLVVVLDYL