Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2416 |
Symbol | |
ID | 4281820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2745033 |
End bp | 2746232 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638139300 |
Product | alanine racemase |
Protein accession | YP_755076 |
Protein GI | 114567922 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000187252 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCAAC TTAAGCATGA TAAGTGGTTG GAGATTGATA TTGATGCAGT CAAGCAAAAC CTGGAGGGGG TTAAATCTCT TCTGGATAGC AGTGTGCACC TGCTGGTGGT GCTAAAGGCC AATGCTTATG GTCATGGGGC AGTTAATATG GCCCGTTTCC TGTATCAGAA TGGGGTGGAC TTCTTTGCGG TAAGCTTTTT ATCGGAAGCC TTGGAATTGA GAAAGGCAGG AATACGCTCC AGTATCCTGG TTTTTAGCCC GGTGGTGGAT GAAGAACAGG TTAAGGAAGC GATTAAAAAC CATATTACCC TCTCCATAAG TTCTTTATTT GACAGCCAGT TGCTGAATCA GGTCAGCGAG CGCCTAAACC AGCCCTTGAG AGTGCACCTG AAGGTGGATA GCGGGTTGGG ACGATTTGGT TTCACTAATA TTGAAGAAAT TAGCACAGCA TGCCAGTCAT TAAAGGAGAA TAGCTGCATA TATATTGAAG GAATATACAC CCATATGGCC GATGCGGCAT CAGGGAACCC CGCTTATACG GAAGAGCAGT TCCGCCGTTT TATGGAAATA GTAAATAAAC TGGTTAAGGC TGGTTATAAG ATTCCGCTGC GGCACTGTGC CAATAGCGCC GTTTTTCTAA AATATCCCCA TATGCATCTG GATGCCGTGC GTATCGGCAC CCTTATTTCG GGGCAGTACC CGGTTGGAGA TTTGCCCCGC CCAGTGGAAT TAATCGACCC TTTTCGCTTT AAATGCAAGA TTATTTCCTT AAAAAGCCTG AAAGCCGGAG ATTATCTGGG TTATTCCCGC AGCTATTGCT TGAAAGAGGA TGCGCAGATA GCGGTGATTC CTGTGGGTTA TATGGATGGA CTGGGGCTAA ATGTCGGCAA TAAAGCCGAG GGCTTCATTG ATTTATTGAA AATTTTGCTT AAAAACATTT TCTTTTATTA TGATTTAGGT CGTTTTAAGT TGCAGGTGAA AATCCGGGAT AGTTTATATC CCGTAAGAGG AAAGGTTTTT ATGCAGATGG CTATGATTGA AATCCCGGCT GGCTTGGATC TGAGCATCGG GGATGAGGTT GAAATCCCGG TAAGAAAAAC CCTGGCAGCC CGAGATTTGG TGAGAATTTA TACTAAAGCC GGAGAAGCAG TAAAAATAGG GAATCAAGAC GGTACTTCCT ATATAGTTGA GGGGGACTAA
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Protein sequence | MKQLKHDKWL EIDIDAVKQN LEGVKSLLDS SVHLLVVLKA NAYGHGAVNM ARFLYQNGVD FFAVSFLSEA LELRKAGIRS SILVFSPVVD EEQVKEAIKN HITLSISSLF DSQLLNQVSE RLNQPLRVHL KVDSGLGRFG FTNIEEISTA CQSLKENSCI YIEGIYTHMA DAASGNPAYT EEQFRRFMEI VNKLVKAGYK IPLRHCANSA VFLKYPHMHL DAVRIGTLIS GQYPVGDLPR PVELIDPFRF KCKIISLKSL KAGDYLGYSR SYCLKEDAQI AVIPVGYMDG LGLNVGNKAE GFIDLLKILL KNIFFYYDLG RFKLQVKIRD SLYPVRGKVF MQMAMIEIPA GLDLSIGDEV EIPVRKTLAA RDLVRIYTKA GEAVKIGNQD GTSYIVEGD
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