Gene Swol_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2416 
Symbol 
ID4281820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2745033 
End bp2746232 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content45% 
IMG OID638139300 
Productalanine racemase 
Protein accessionYP_755076 
Protein GI114567922 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000187252 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAAC TTAAGCATGA TAAGTGGTTG GAGATTGATA TTGATGCAGT CAAGCAAAAC 
CTGGAGGGGG TTAAATCTCT TCTGGATAGC AGTGTGCACC TGCTGGTGGT GCTAAAGGCC
AATGCTTATG GTCATGGGGC AGTTAATATG GCCCGTTTCC TGTATCAGAA TGGGGTGGAC
TTCTTTGCGG TAAGCTTTTT ATCGGAAGCC TTGGAATTGA GAAAGGCAGG AATACGCTCC
AGTATCCTGG TTTTTAGCCC GGTGGTGGAT GAAGAACAGG TTAAGGAAGC GATTAAAAAC
CATATTACCC TCTCCATAAG TTCTTTATTT GACAGCCAGT TGCTGAATCA GGTCAGCGAG
CGCCTAAACC AGCCCTTGAG AGTGCACCTG AAGGTGGATA GCGGGTTGGG ACGATTTGGT
TTCACTAATA TTGAAGAAAT TAGCACAGCA TGCCAGTCAT TAAAGGAGAA TAGCTGCATA
TATATTGAAG GAATATACAC CCATATGGCC GATGCGGCAT CAGGGAACCC CGCTTATACG
GAAGAGCAGT TCCGCCGTTT TATGGAAATA GTAAATAAAC TGGTTAAGGC TGGTTATAAG
ATTCCGCTGC GGCACTGTGC CAATAGCGCC GTTTTTCTAA AATATCCCCA TATGCATCTG
GATGCCGTGC GTATCGGCAC CCTTATTTCG GGGCAGTACC CGGTTGGAGA TTTGCCCCGC
CCAGTGGAAT TAATCGACCC TTTTCGCTTT AAATGCAAGA TTATTTCCTT AAAAAGCCTG
AAAGCCGGAG ATTATCTGGG TTATTCCCGC AGCTATTGCT TGAAAGAGGA TGCGCAGATA
GCGGTGATTC CTGTGGGTTA TATGGATGGA CTGGGGCTAA ATGTCGGCAA TAAAGCCGAG
GGCTTCATTG ATTTATTGAA AATTTTGCTT AAAAACATTT TCTTTTATTA TGATTTAGGT
CGTTTTAAGT TGCAGGTGAA AATCCGGGAT AGTTTATATC CCGTAAGAGG AAAGGTTTTT
ATGCAGATGG CTATGATTGA AATCCCGGCT GGCTTGGATC TGAGCATCGG GGATGAGGTT
GAAATCCCGG TAAGAAAAAC CCTGGCAGCC CGAGATTTGG TGAGAATTTA TACTAAAGCC
GGAGAAGCAG TAAAAATAGG GAATCAAGAC GGTACTTCCT ATATAGTTGA GGGGGACTAA
 
Protein sequence
MKQLKHDKWL EIDIDAVKQN LEGVKSLLDS SVHLLVVLKA NAYGHGAVNM ARFLYQNGVD 
FFAVSFLSEA LELRKAGIRS SILVFSPVVD EEQVKEAIKN HITLSISSLF DSQLLNQVSE
RLNQPLRVHL KVDSGLGRFG FTNIEEISTA CQSLKENSCI YIEGIYTHMA DAASGNPAYT
EEQFRRFMEI VNKLVKAGYK IPLRHCANSA VFLKYPHMHL DAVRIGTLIS GQYPVGDLPR
PVELIDPFRF KCKIISLKSL KAGDYLGYSR SYCLKEDAQI AVIPVGYMDG LGLNVGNKAE
GFIDLLKILL KNIFFYYDLG RFKLQVKIRD SLYPVRGKVF MQMAMIEIPA GLDLSIGDEV
EIPVRKTLAA RDLVRIYTKA GEAVKIGNQD GTSYIVEGD