| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2415 |
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| Symbol | |
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| ID | 4281819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2744138 |
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| End bp | 2745031 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638139299 |
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| Product | periplasmic serine proteases (ClpP class) |
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| Protein accession | YP_755075 |
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| Protein GI | 114567921 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.025979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAA AACTGGTGGT TTTTCTTCTG CTAATATTTC TTTTGCTTAT GGCCGGCCTG
TCCATTAGGG CTGTAAACCG ATTGGACCAT GGTTCAACGC GCGAGGGGAC AGCTACCATT
GCTGTTGTCC AGATTAACGG TCCCATCAGC GGGGTTTCCA GCTGGCTGGA AAACAGTAGT
TCTACCGCCG GCGATATTAT GGAGGCCATT AGAAAGGCGG GCAAGCGCGA GGATATTAAA
GCAGTAGTTG TGAGGATTGA TAGTCCCGGC GGTAGTGCCG GGGCTTCACA GGAAATAGCC
ATGGAACTGG AACGCTTGCG GGAGAAGGGC AAACCGGTAG TTACTTCCAT GGGAGATGTT
TGTGCTTCCG GGGGCTACTG GATAGCCTGC AGCACTGATC ATATAGTAGC CAACGGTGCC
AGCTTGACCG GCAGTATTGG CGTTATTATG CAGCTCAGTA ACCTGGAAGG ACTATATGGA
AAACTGGGTA TCAGAAACCA GACTATCAAG AGTGGTGAGC ATAAAGACAT GGGCTCTACC
TCGCGAGAAC TGAGTGCGGA AGAGGAAAAA ATTCTTCAGG ACTTGGTGGA TGATTCTTAC
CAGCAATTTT TGGAACAGGT GCAAAAAGGC CGCCAGGAAA AGATTGCCGC GGATAAACTG
TTGGAGATTG CTGATGGGAG GATATTCACC GGCAAGCAAG CTTTGGAACT AGGGCTGGTA
GACAGCTTGG GCAATTATTA TGACGCGGTG CGACAAGCGG AGAAAATGGC AGGAATCAAG
GGCGAAAGCA AGTTGGAAGT GATTAATGCC TTTAGCTGGT GGGAGCGCCT TAAACTAGAC
ATGTTTAACC CCAACCTCTT CCAGCAGGGA GGATTTGCGG AATTAAAATA CTGA
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| Protein sequence | MHKKLVVFLL LIFLLLMAGL SIRAVNRLDH GSTREGTATI AVVQINGPIS GVSSWLENSS
STAGDIMEAI RKAGKREDIK AVVVRIDSPG GSAGASQEIA MELERLREKG KPVVTSMGDV
CASGGYWIAC STDHIVANGA SLTGSIGVIM QLSNLEGLYG KLGIRNQTIK SGEHKDMGST
SRELSAEEEK ILQDLVDDSY QQFLEQVQKG RQEKIAADKL LEIADGRIFT GKQALELGLV
DSLGNYYDAV RQAEKMAGIK GESKLEVINA FSWWERLKLD MFNPNLFQQG GFAELKY
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