| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2392 |
|---|
| Symbol | |
|---|
| ID | 4282041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2722686 |
|---|
| End bp | 2723933 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638139276 |
|---|
| Product | glycine hydroxymethyltransferase |
|---|
| Protein accession | YP_755052 |
|---|
| Protein GI | 114567898 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATA TTCAAGAGTA TGTTAAGCCG GTTGACCCAG AAGTGGCGGA AGCCATTGAA
AAGGAAGAGG CCAGGCAAAA CAACAAATTG GAACTAATTG CTTCGGAAAA CTTTGTATCC
CGTGCTGTTA TGGCTGCCCA GGGTTCGGTG ATGACCAATA AATATGCCGA AGGTTTACCT
GGGGCCAGGT ATTATGGTGG TTGCGAATAT GTGGACATAG TAGAAGAACT GGCCCGGGAC
AGGGTAAAAG AGATTTTCGG AGCTGAACAT GCCAATGTGC AACCCCATTC CGGCGCCCAA
GCTAATACAG CGGTATATTT TGCGGCGTTG CAGCCGGGAC AAACCATCAT GGGTATGAAT
CTAAATCATG GGGGACATCT TACTCACGGC AGTAAAGTGA ATATATCCGG GAAGTATTTC
AATATTGTGG ACTATGGGGT TAACAGGGAT ACAGAGAGAA TTGATTATGA AGAGTTACGA
GAAATAGCGC TAAAAGCTCG TCCCCAAATG ATTGTGGCCG GAGCCAGTGC TTACCCCCGG
ATTTTGGATT TTAAAAAGTT CCGGGAAATC GCTGATGAAG CCGGGGCTCT TCTTTTTGTT
GATATGGCCC ACATCGCTGG TCTGGTAGCT GCAGGCCTTC ATCCCAGCCC GGTTCCCTAT
GCCGATTTTG TATCCTCTAC CACTCACAAA ACTTTGCGTG GACCCCGGGG AGGATTTATT
TTATGCCGGC AAGAATGGGC CAACAAAATA GACAAAGCGG TTTTCCCCGG CATACAGGGA
GGGCCTTTGA TGCATGTAAT AGCAGCCAAG GCCGTTTGCT TCAAAGAGGC TCTTACGCCG
GAATTTAAAG CCTATCAGCA GGATATTGTT AACAATGCCG CTATATTGGC AAAGGCTTTG
ATGGAGCAGG GTTTACGTGT GGTATCAGGA GGAACGGACA ATCACCTCAT GTTAGTGGAT
GTCCGTCCCA AAGGACTTAA TGGCCGGGAT GCCGAAGCCA TTCTGGAATC CATAAATATA
ACCGTAAACA AAAATGCTAT CCCCTTTGAT CCAGAGAAGC CGACTGTTAC CAGTGGCATC
CGGGTAGGAA CTCCAGCGGT TACCAGCCGG GCGCTAAAAG GAGACGATAT GAGGGAATTG
GCCCGGGCTA TAACCCTGGT ACTGGACAAG CATGACAGCG AGGAAGTAAA GGAAGAAGCC
CGGAGGATAG TAAAAGCTCT CTGTGATAAG TATCCACTGT ATACCTAG
|
|---|
| Protein sequence | MDYIQEYVKP VDPEVAEAIE KEEARQNNKL ELIASENFVS RAVMAAQGSV MTNKYAEGLP
GARYYGGCEY VDIVEELARD RVKEIFGAEH ANVQPHSGAQ ANTAVYFAAL QPGQTIMGMN
LNHGGHLTHG SKVNISGKYF NIVDYGVNRD TERIDYEELR EIALKARPQM IVAGASAYPR
ILDFKKFREI ADEAGALLFV DMAHIAGLVA AGLHPSPVPY ADFVSSTTHK TLRGPRGGFI
LCRQEWANKI DKAVFPGIQG GPLMHVIAAK AVCFKEALTP EFKAYQQDIV NNAAILAKAL
MEQGLRVVSG GTDNHLMLVD VRPKGLNGRD AEAILESINI TVNKNAIPFD PEKPTVTSGI
RVGTPAVTSR ALKGDDMREL ARAITLVLDK HDSEEVKEEA RRIVKALCDK YPLYT
|
|---|
| |