| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2336 |
|---|
| Symbol | |
|---|
| ID | 4282970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2666900 |
|---|
| End bp | 2668984 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638139217 |
|---|
| Product | translation elongation and release factor (GTPase) |
|---|
| Protein accession | YP_754998 |
|---|
| Protein GI | 114567844 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0109511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA GCTATGATTT AACTGCTATT AGAAATATTG GTATTATGGC TCATATCGAT
GCCGGAAAAA CAACCACCAC AGAAAGAATA TTGTTTTATT CCGGACGGGT TCATAAGATG
GGTGAAGTGG ATAAAGGTAC CGCTACTATG GATTGGATGA GCCAGGAACA GGAAAGAGGA
ATAACCATAA CTTCGGCAGC TACAGCTTGC AAATGGAAGG GTTATTTTGT CAATATTATC
GACACGCCCG GCCATGTGGA CTTTACTGTT GAGGTAGAGC GCTCATTAAG AGTGCTTGAT
GGGTCTATAG GTATTTTTTG CGCGGTAGCC GGCGTGCAAC CACAATCAGA AACCGTATGG
AGACAGGCTG ATCGTTATCA TGTTCCTCGC ATTGCTTATA TCAATAAAAT GGACCGTGTT
GGCGCTGACT TTTTTCGAGT AATCGAAATG ATAAGAAAAA ATCTGAGCAG TGATGCGGTG
GCCATACAAT TACCCATTGG GGTAGAGGAA GCATTCTCGG GCATTATTGA TTTGATTGAT
TTTAAAGCCT ACATCTATGA AGATGAGAGC GGCGAGCAAT ACCAGGAGAG GGAATTAAAC
CCTGATGAAA GGTCAAAAGC TCAGGAATTC AGGAATCTTC TTCTGGAAAG ATTAGCAGAA
TACGATGACA GTATACTGGA AAAATACCTG GAGGCCCGGG AGATTTCCCC AGCGGAAATC
AGAAGTTCTT TGAGAAAAAG TTGTATCTCC AACCAAATAG TGCCGGTACT TTGCGGGTCT
TCATTTAAGA ACAAGGGAGT ACAGATGCTG CTGGATGCGG TGGTAAGCTA CCTTCCTTCC
CCTCTTGATA TACCTGCAAT TGAGGCGATG GATATAGCCA GTGGAGAAAA CGTGAGAATA
AAGCCCGAAG TTGATGCCCC TCTTTGTGCC CTGGCGTTTA AACTGGCCAG TGACCCCTAT
GTAGGTAAAC TAACCTACTT TCGCATTTAC TCCGGTCGGA TAAAGGCAGG AAGCACTCTA
TTCAACAGTC GCCAGGATAG AAAAGAGCGC TTTACCAGAT TGCTGAAAAT GCATGCCAAT
CACCGTGAGG AAATAGAGGA AGCTTGTGCC GGTGATATTG TAGCCGGGGT AGGCTTGAAA
AATACGGCAA CTGGTGACAC CCTCTGCAGC GAAAACCATC TTGTCTTGTT GGAAACAATT
GACTTTCCGC AACCGGTTAT TGATGTAGCT ATCGAGGCCA AAACCAGAGC TGACCAGGAG
AGGATTGAAG AAAGCCTGCG GCGACTGGCA GAGGAAGACC CTACATTCCA AACCAGACAG
GATAAAGAAA GCGGCCAGAT GATAATATCC GGTATGGGGG AATTGCACCT GGAGATTATT
ATTGATCGCC TGCTCAAAGA ATTTAAGGTT AATGCCAATA TCGGCAAGCC CCAGGTGGCC
TATAAGGAAA GCGTTAAGAA AAGGACCGCT GCGGAAGTCA AATTTGACCG GCAAGCTGGT
GGTCGCGGGC AATATGCTCA TGTAGTGTTG GAAGTTTTAC CCCTGGCTGA GGGTCAGGGT
AAAAGATTTG CAGATAAATC CAGCCCTGAA GCAATCCCCC GAGAATTTAT ACCCGCGGTG
GAAATGGGGG TGCGGGAAGC TTTACAGGCG GGCATACTGG GTGGATACCC GGTGGATGAT
GTGGAAGTAG TTCTAAAGGG TGGTTCCTAT CATGAGGTGG ATTCCAACGA ACCAGCCTTT
AAGATTGCCG CCAGTATGGC ATTGAAGGAA GCTTTGGAAA ACGCCCAATC AGTTTTCCTG
GAACCAGTAA TGGATCTGGA AATTATCTGT CCCGAGGAAT ACCTGGGGGA TGTAATTTCC
GATCTAAATG CTCGCCGGGG AAGGATAATA GCTTTGGAAG AGAACCGCGA TACTAAAGCG
GTAAAAGGGT TGGTACCACT GGCGGAAACC TTTGGTTATG CTACCAGTTT AAGATCCCTC
ACTCAGGGTC GAGCCAGTTT TTCCATGAAG ATAAAGAACT TTGCCGAGGT ACCCGAGTCC
AAGAGCCGGG AGATAATAGC CCGAAGATAT GGGCTGCCGG TGTAA
|
|---|
| Protein sequence | MADSYDLTAI RNIGIMAHID AGKTTTTERI LFYSGRVHKM GEVDKGTATM DWMSQEQERG
ITITSAATAC KWKGYFVNII DTPGHVDFTV EVERSLRVLD GSIGIFCAVA GVQPQSETVW
RQADRYHVPR IAYINKMDRV GADFFRVIEM IRKNLSSDAV AIQLPIGVEE AFSGIIDLID
FKAYIYEDES GEQYQERELN PDERSKAQEF RNLLLERLAE YDDSILEKYL EAREISPAEI
RSSLRKSCIS NQIVPVLCGS SFKNKGVQML LDAVVSYLPS PLDIPAIEAM DIASGENVRI
KPEVDAPLCA LAFKLASDPY VGKLTYFRIY SGRIKAGSTL FNSRQDRKER FTRLLKMHAN
HREEIEEACA GDIVAGVGLK NTATGDTLCS ENHLVLLETI DFPQPVIDVA IEAKTRADQE
RIEESLRRLA EEDPTFQTRQ DKESGQMIIS GMGELHLEII IDRLLKEFKV NANIGKPQVA
YKESVKKRTA AEVKFDRQAG GRGQYAHVVL EVLPLAEGQG KRFADKSSPE AIPREFIPAV
EMGVREALQA GILGGYPVDD VEVVLKGGSY HEVDSNEPAF KIAASMALKE ALENAQSVFL
EPVMDLEIIC PEEYLGDVIS DLNARRGRII ALEENRDTKA VKGLVPLAET FGYATSLRSL
TQGRASFSMK IKNFAEVPES KSREIIARRY GLPV
|
|---|
| |