| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2321 |
|---|
| Symbol | rplE |
|---|
| ID | 4282990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2658749 |
|---|
| End bp | 2659285 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638139202 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_754983 |
|---|
| Protein GI | 114567829 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000058995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGGT TATATGAAAC ATATAAAAAA GACATAGTGC CAAAGATGAT GGAGAAATTC
CAGTATGATA ATATTATGCA GGTTCCCAAA GTAGAACGGG TGGTAGTAAA TATAGGAGTG
GGAGAGGCCA TTCAGAATCC CAAGGCTCTT GATGGAGCTG TAAACGATCT AAGCATTATA
TCCGGTCAAA AGCCGGTTAT AACCAGAGCG CGTAAATCCA TTGCCGGATT TAAATTAAGG
GAAGGTATGG CCATCGGCTG TAAAGTCACC CTGCGGGGGG AGAGAATGTA TGACTTTTTG
GATCGCCTGA TCAATCTGGC CCTTCCCCGG GTTCGTGACT TCAGGGGAGT ATCCCCGCAG
GCTTTTGATG GAAGAGGTAA TTATTCCCTG GGGATAAAGG AACAAACCAT CTTTCCGGAA
ATAGATTACG ACAAAATTGA TAAAATCAGG GGTTTGGAGG TAGTAGTGGT TACCACCGCC
AAGACTGATG AAGAAGCCAG GGAATTGTTA AAAAGTATGG GAATGCCATT TAGATAG
|
|---|
| Protein sequence | MARLYETYKK DIVPKMMEKF QYDNIMQVPK VERVVVNIGV GEAIQNPKAL DGAVNDLSII
SGQKPVITRA RKSIAGFKLR EGMAIGCKVT LRGERMYDFL DRLINLALPR VRDFRGVSPQ
AFDGRGNYSL GIKEQTIFPE IDYDKIDKIR GLEVVVVTTA KTDEEARELL KSMGMPFR
|
|---|
| |