Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2295 |
Symbol | |
ID | 4283034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2643844 |
End bp | 2644623 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638139176 |
Product | N-acetylmuramoyl-L-alanine amidase-like protein |
Protein accession | YP_754957 |
Protein GI | 114567803 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000158579 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACATAA GGAAACCATA CTTTTTTGCG GAAAAAAAGA CCGGCATATT ACTGCCTATG TTTCTCTTCA TAATTCTTTC TTATGGGGTG GTAGCCAATG AATATCAACC TGCCGAGCCA GTATTGTCCT ACAGCCTGGC CAACCAGCTT ATTGTAATTG ATCCTGGGCA TGGGGGTTTT GACCCGGGGG CCTGGCGGGG CGAATTAATG GAAAAGAATA TTACTCTGCC CATAAGTAAA AAGCTGCAAC AGCATTTAAG TCAGGCTGGG GCTATAGTTG TTATGTTACG AGAAGAGGAT AAAGATCTGG CGGGAGAACA ATTCAAAGGC AGCCTGAAAG AGCGCAAGCG CCAGGATCTT AAGGCTCGGG TCGATGAAGC TAACCGGCTC AAGGCCGACC TATATATCAG CATTCACACT AATGCTGATC CCTCACCCCG CTGGTACGGG GCCCAGACTT TTTATAATGC GCATAGTGAA GAGAGCAAAA TAATGGCAGA GTGCGTTCAG GACGAATTGA CCCGGATTTT GGGTAATACT AAGCGTAAAG CCAAGCCTGG CAGCTATTAT ATTATTGATA AGACCGAAAT GCCGGCGGTA ATTGTGGAGG TGGGTTTTTT GTCCCATCCG GCTGAGGCTA AGCTTCTAAA TGACCCGGCT TATCAAAACA AGGTGGCCTA TGCTGTGTTT TCCGGTATAG TGAATTATCA GGCCAGTCAA ATGGAGCCGG TGGATAAATC TGATAAAAAG ATAGTCACTG GTTCAGATAT AGCAAAATAG
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Protein sequence | MYIRKPYFFA EKKTGILLPM FLFIILSYGV VANEYQPAEP VLSYSLANQL IVIDPGHGGF DPGAWRGELM EKNITLPISK KLQQHLSQAG AIVVMLREED KDLAGEQFKG SLKERKRQDL KARVDEANRL KADLYISIHT NADPSPRWYG AQTFYNAHSE ESKIMAECVQ DELTRILGNT KRKAKPGSYY IIDKTEMPAV IVEVGFLSHP AEAKLLNDPA YQNKVAYAVF SGIVNYQASQ MEPVDKSDKK IVTGSDIAK
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