Gene Swol_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2262 
Symbol 
ID4283068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp2610412 
End bp2611032 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content43% 
IMG OID638139142 
ProductDNA repair proteins 
Protein accessionYP_754924 
Protein GI114567770 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.195306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCAACT ATGATAATCT TCAATATCTT TCCAACCTGG AATTGCTATC GTTGACATTG 
CGAGAAAGAC CAGACAGCCC CGTAGCAAGC AACCTGAATA ATCTCATGGA ACATCCTGAA 
CAACTTATTA ACAGTACTGT CGAAGAGCTA ACGAATATTC AGGGAGTAGG TAAAAAGAAG 
GCTTTGCAGT TAAAGGCCAC TGTGGAACTC GGACGGAGAC TTTATCAAGC ACCACCCAAG 
GGAAAAACTA TTATAAAGGG TCCCATGGAT GTATCTGATT TAGTACAGGC TCAGATGCGT 
TACTTGGATC GGGAACATTT CAAAGCCATC CTGCTAAACC GCAAAAACGG TATCCTGTCC 
GTCGAGACTA TAAGTATTGG AACCTTGACC AGCAGTATGG TTCATCCTCG GGAAGTATTC 
AAACCCGCTA TTAGAAAGAA CGCTGCTTCT GTAATCCTAG TCCATAATCA CCCTTCTGGA 
GATCCAACCC CATCACGTGA AGATATCGAG ATTACTAAGC GCTTATCCGA GTGTGGTCAG 
CTCCTTGGGA TAGAAGTACT GGATCACATC ATTATTGGCG ATGGTAGCTG GAATAGTCTT 
AAAACATCAG GATTATTCTA A
 
Protein sequence
MTNYDNLQYL SNLELLSLTL RERPDSPVAS NLNNLMEHPE QLINSTVEEL TNIQGVGKKK 
ALQLKATVEL GRRLYQAPPK GKTIIKGPMD VSDLVQAQMR YLDREHFKAI LLNRKNGILS 
VETISIGTLT SSMVHPREVF KPAIRKNAAS VILVHNHPSG DPTPSREDIE ITKRLSECGQ 
LLGIEVLDHI IIGDGSWNSL KTSGLF